Evidence map›Paper›PMID 37333162›Full record

ArticlebioRxiv : the preprint server for biology2023

Quantile Regression for biomarkers in the UK Biobank.

Chen Wang, Tianying Wang, Ying Wei, Hugues Aschard, Iuliana Ionita-Laza

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Chen WangDepartment of Biostatistics, Columbia University, New York, USA.
Tianying WangCenter for Statistical Science & Department of Industrial Engineering, Tsinghua University, Beijing, China.
Ying WeiDepartment of Biostatistics, Columbia University, New York, USA.
Hugues AschardInstitut Pasteur, Université Paris Cité, Department of Computational Biology, Paris, France.
Iuliana Ionita-LazaDepartment of Biostatistics, Columbia University, New York, USA.

Funding

Novel Statistical methods for DNA Sequencing Data, and applications to Autism.R01MH095797 · NIMH · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI IONITA, IULIANA · 2012 to 2022
$3.1M
Multi-omics approaches for gene discovery in Alzheimer's Disease.RF1AG072272 · NIA · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI IONITA, IULIANA, WEI, YING · 2021 to 2021
$1.6M
Multi-omics approaches for gene discovery in Alzheimer's Disease.R01AG072272 · NIA · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI IONITA, IULIANA, WEI, YING · 2024 to 2024
$552k
NIA NIH HHS R01 AG072272NIA NIH HHS RF1 AG072272NIMH NIH HHS R01 MH095797
6 · The paper itself

Abstract

Genome-wide association studies (GWAS) for biomarkers important for clinical phenotypes can lead to clinically relevant discoveries. GWAS for quantitative traits are based on simplified regression models modeling the conditional mean of a phenotype as a linear function of genotype. An alternative and easy to apply approach is quantile regression that naturally extends linear regression to the analysis of the entire conditional distribution of a phenotype of interest by modeling conditional quantiles within a regression framework. Quantile regression can be applied efficiently at biobank scale using standard statistical packages in much the same way as linear regression, while having some unique advantages such as identifying variants with heterogeneous effects across different quantiles, including non-additive effects and variants involved in gene-environment interactions; accommodating a wide range of phenotype distributions with invariance to trait transformation; and overall providing more detailed information about the underlying genotype-phenotype associations. Here, we demonstrate the value of quantile regression in the context of GWAS by applying it to 39 quantitative traits in the UK Biobank (

Identifiers

PMID37333162
PMCPMC10274625

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.