Evidence map›Paper›PMID 37329186›Full record

ArticleCancer medicine2023

The genetic polymorphisms of immune-related genes contribute to the susceptibility and survival of lymphoma.

Chaoyang Gu, Can Can, Jinting Liu, Yihong Wei, Xinyu Yang, Xiaodong Guo, Ruiqing Wang, Wenbo Jia, Wancheng Liu, Daoxin Ma

Open access · goldAbstract read
In one paragraph

Article in Cancer medicine, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

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5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Chaoyang GuDepartment of Hematology, Qilu Hospital of Shandong University, Jinan, China.
Can CanDepartment of Hematology, Qilu Hospital of Shandong University, Jinan, China.
Jinting LiuDepartment of Hematology, Qilu Hospital of Shandong University, Jinan, China.
Yihong WeiDepartment of Hematology, Qilu Hospital of Shandong University, Jinan, China.
Xinyu YangDepartment of Hematology, Qilu Hospital of Shandong University, Jinan, China.
Xiaodong GuoDepartment of Hematology, Qilu Hospital of Shandong University, Jinan, China.
Ruiqing WangDepartment of Hematology, Qilu Hospital of Shandong University, Jinan, China.
Wenbo JiaDepartment of Hematology, Qilu Hospital of Shandong University, Jinan, China.
Wancheng LiuDepartment of Hematology, Qilu Hospital of Shandong University, Jinan, China.
Daoxin MaDepartment of Hematology, Qilu Hospital of Shandong University, Jinan, China.ORCID 0000-0003-0664-8441
Qilu Hospital of Shandong University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThough immunological abnormalities have been proven involved in the pathogenesis of lymphoma, the underlying mechanism remains unclear.

methodsWe investigated 25 single nucleotide polymorphisms (SNPs) of 21 immune-related genes and explored their roles in lymphoma. The genotyping assay of the selected SNPs was used by the Massarray platform. Logistic regression and Cox proportional hazards models were used to analyze the associations of SNPs and the susceptibility of lymphoma or clinical characteristics of lymphoma patients. In addition, Least Absolute Shrinkage and Selection Operator regression was used to further analyze the relationships with the survival of lymphoma patients and candidate SNPs, and the significant difference between genotypes was verified by the expression of RNA.

resultsBy comparing 245 lymphoma patients with 213 healthy controls, we found eight important SNPs related to the susceptibility of lymphoma, which were involved in JAK-STAT, NF-κB and other functional pathways. We further analyzed the relationships between SNPs and clinical characteristics. Our results showed that both IL6R (rs2228145) and STAT5B (rs6503691) significantly contributed to the Ann Arbor stages of lymphoma. And the STAT3 (rs744166), IL2 (rs2069762), IL10 (rs1800871), and PARP1 (rs907187) manifested a significant relationship with the peripheral blood counts in lymphoma patients. More importantly, the IFNG (rs2069718) and IL12A (rs6887695) were associated with the overall survival (OS) of lymphoma patients remarkably, and the adverse effects of GC genotypes could not be offset by Bonferroni correction for multiple comparison in rs6887695 especially. Moreover, we determined that the mRNA expression levels of IFNG and IL12A were significantly decreased in patients with shorter-OS genotypes.

conclusionsWe used multiple methods of analysis to predict the correlations between lymphoma susceptibility, clinical characteristics or OS with SNPs. Our findings reveal that immune-related genetic polymorphisms contribute to the prognosis and treatment of lymphoma, which may serve as promising predictive targets.

Indexed as

LymphomaCase-Control StudiesGenetic Predisposition to DiseaseGenotypeHumansPolymorphism, Single NucleotidePrognosisProportional Hazards Modelsdisease progressiongenetic polymorphismsimmune-related geneslymphomasurvival

Identifiers

PMID37329186
PMCPMC10417154
OpenAlexW4380985596

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.