Evidence map›Paper›PMID 37328788›Full record

ArticleBMC bioinformatics2023

Endoplasmic reticulum stress-related gene model predicts prognosis and guides therapies in lung adenocarcinoma.

Yuqi Song, Jianzun Ma, Linan Fang, Mingbo Tang, Xinliang Gao, Dongshan Zhu, Wei Liu

Open access · goldAbstract read
In one paragraph

Article in BMC bioinformatics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
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  3. Dual roles of CD11bFrontiers in immunology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Yuqi SongDepartment of Thoracic Surgery, The First Hospital of Jilin University, Changchun, Jilin, People's Republic of China.
Jianzun MaDepartment of Thoracic Surgery, The First Hospital of Jilin University, Changchun, Jilin, People's Republic of China.
Linan FangDepartment of Thoracic Surgery, The First Hospital of Jilin University, Changchun, Jilin, People's Republic of China.
Mingbo TangDepartment of Thoracic Surgery, The First Hospital of Jilin University, Changchun, Jilin, People's Republic of China.
Xinliang GaoDepartment of Thoracic Surgery, The First Hospital of Jilin University, Changchun, Jilin, People's Republic of China.
Dongshan ZhuDepartment of Thoracic Surgery, The First Hospital of Jilin University, Changchun, Jilin, People's Republic of China.
Wei LiuDepartment of Thoracic Surgery, The First Hospital of Jilin University, Changchun, Jilin, People's Republic of China. l_w01@jlu.edu.cn.
First Hospital of Jilin University · CNJilin University · CN

Funding

National Natural Science Foundation of China #82003284Scientific Research Foundation of The First Hospital of Jilin University #JDYY11202015
6 · The paper itself

Abstract

backgroundThe prognosis and survival of lung adenocarcinoma (LUAD) patients are still not promising despite recent breakthroughs in treatment. Endoplasmic reticulum stress (ERS) is a self-protective mechanism resulting from an imbalance in quality control of unfolded proteins when cells are stressed, which plays an active role in lung cancer development, but the relationship between ERS and the pathological characteristics and clinical prognosis of LUAD patients remains unclear.

methodsLASSO and Cox regression were applied based on sequencing information to construct the model, which was validated to be robust. The risk scores of the patients were calculated using the formula provided by the model, and the patients were divided into high and low-risk groups according to the median cut-off of risk scores. Cox regression analysis identifies independent prognostic factors for these patients, and enrichment analysis of prognosis-related genes was also performed. The relationship between risk scores and tumor mutation burden (TMB), cancer stem cell index, and drug sensitivity was explored.

resultsWe constructed a 13-gene prognostic model for LUAD patients. Patients in the high-risk group had worse overall survival, lower immune score and ESTIMATE score, higher TMB, higher cancer stem cell index, and higher sensitivity to conventional chemotherapeutic agents. In addition, we constructed a nomogram that predicts 5-year survival in LUAD patients, which helps clinicians to foresee the prognosis from a new perspective.

conclusionsOur results highlight the association of ERS with LUAD and the potential use of ERS in guiding treatment.

Indexed as

Adenocarcinoma of LungLung NeoplasmsEndoplasmic Reticulum StressHumansNeoplastic Stem CellsRisk FactorsEndoplasmic Reticulum StressGene ModelLung AdenocarcinomaPrognosisTherapy

Identifiers

PMID37328788
PMCPMC10276379
OpenAlexW4380992655

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.