Evidence map›Paper›PMID 37328555›Full record

ArticleScientific reports2023

Deep learning for diffusion in porous media.

Krzysztof M Graczyk, Dawid Strzelczyk, Maciej Matyka

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
2.8field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Krzysztof M GraczykFaculty of Physics and Astronomy, Institute of Theoretical Physics, University of Wrocław, pl. M. Borna 9, 50-204, Wrocław, Poland. krzysztof.graczyk@uwr.edu.pl.
Dawid StrzelczykFaculty of Physics and Astronomy, Institute of Theoretical Physics, University of Wrocław, pl. M. Borna 9, 50-204, Wrocław, Poland.
Maciej MatykaFaculty of Physics and Astronomy, Institute of Theoretical Physics, University of Wrocław, pl. M. Borna 9, 50-204, Wrocław, Poland.
University of Wrocław · PL

Funding

National Science Centre, Poland under the OPUS call in the Weave programme 2021/43/I/ST3/00228University of Wroclaw Initiative Excellence-Research University program for University of Wroclaw
6 · The paper itself

Abstract

We adopt convolutional neural networks (CNN) to predict the basic properties of the porous media. Two different media types are considered: one mimics the sand packings, and the other mimics the systems derived from the extracellular space of biological tissues. The Lattice Boltzmann Method is used to obtain the labeled data necessary for performing supervised learning. We distinguish two tasks. In the first, networks based on the analysis of the system's geometry predict porosity and effective diffusion coefficient. In the second, networks reconstruct the concentration map. In the first task, we propose two types of CNN models: the C-Net and the encoder part of the U-Net. Both networks are modified by adding a self-normalization module [Graczyk et al. in Sci Rep 12, 10583 (2022)]. The models predict with reasonable accuracy but only within the data type, they are trained on. For instance, the model trained on sand packings-like samples overshoots or undershoots for biological-like samples. In the second task, we propose the usage of the U-Net architecture. It accurately reconstructs the concentration fields. In contrast to the first task, the network trained on one data type works well for the other. For instance, the model trained on sand packings-like samples works perfectly on biological-like samples. Eventually, for both types of the data, we fit exponents in the Archie's law to find tortuosity that is used to describe the dependence of the effective diffusion on porosity.

Indexed as

Deep LearningDiffusionNeural Networks, ComputerPorositySandSand

Identifiers

PMID37328555
PMCPMC10276037
OpenAlexW4380988642

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.