Evidence map›Paper›PMID 37328527›Full record

ArticleScientific reports2023

Genomic studies of the additive and dominant genetic control on production traits of Euterpe edulis fruits.

Guilherme Bravim Canal, Gabriela França Oliveira, Francine Alves Nogueira de Almeida, Marcello Zatta Péres, Gabriel Lenen Javarini Moro, Wagner Bastos Dos Santos Oliveira, Camila Ferreira Azevedo, Moysés Nascimento, Marcia Flores da Silva Ferreira, Adésio Ferreira

Abstract read
In one paragraph

Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Guilherme Bravim CanalDepartment of Agronomy, Federal University of Espírito Santo, Alegre, Espírito Santo, 29500-000, Brazil.
Gabriela França OliveiraDepartment of Statistics, Federal University of Viçosa, Viçosa, Minas Gerais, Brazil.
Francine Alves Nogueira de AlmeidaDepartment of Agronomy, Federal University of Espírito Santo, Alegre, Espírito Santo, 29500-000, Brazil.
Marcello Zatta PéresDepartment of Agronomy, Federal University of Espírito Santo, Alegre, Espírito Santo, 29500-000, Brazil.
Gabriel Lenen Javarini MoroDepartment of Agronomy, Federal University of Espírito Santo, Alegre, Espírito Santo, 29500-000, Brazil.
Wagner Bastos Dos Santos OliveiraDepartment of Agronomy, Federal University of Espírito Santo, Alegre, Espírito Santo, 29500-000, Brazil.
Camila Ferreira AzevedoDepartment of Statistics, Federal University of Viçosa, Viçosa, Minas Gerais, Brazil.
Moysés NascimentoDepartment of Statistics, Federal University of Viçosa, Viçosa, Minas Gerais, Brazil.
Marcia Flores da Silva FerreiraDepartment of Agronomy, Federal University of Espírito Santo, Alegre, Espírito Santo, 29500-000, Brazil. marcia.ferreira@ufes.br.
Adésio FerreiraDepartment of Agronomy, Federal University of Espírito Santo, Alegre, Espírito Santo, 29500-000, Brazil.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In forest genetic improvement programs for non-domesticated species, limited knowledge of kinship can compromise or make the estimation of variance components and genetic parameters of traits of interest unfeasible. We used mixed models and genomics (in the latter, considering additive and non-additive effects) to evaluate the genetic architecture of 12 traits in juçaizeiro for fruit production. A population of 275 genotypes without genetic relationship knowledge was phenotyped over three years and genotyped by whole genome SNP markers. We have verified superiority in the quality of the fits, the prediction accuracy for unbalanced data, and the possibility of unfolding the genetic effects into their additive and non-additive terms in the genomic models. Estimates of the variance components and genetic parameters obtained by the additive models may be overestimated since, when considering the dominance effect in the model, there are substantial reductions in them. The number of bunches, fresh fruit mass of bunch, rachis length, fresh mass of 25 fruits, and amount of pulp were strongly influenced by the dominance effect, showing that genomic models with such effect should be considered for these traits, which may result in selective improvements by being able to return more accurate genomic breeding values. The present study reveals the additive and non-additive genetic control of the evaluated traits and highlights the importance of genomic information-based approaches for populations without knowledge of kinship and experimental design. Our findings underscore the critical role of genomic data in elucidating the genetic control architecture of quantitative traits, thereby providing crucial insights for driving species' genetic improvement.

Indexed as

EuterpeFruitGenomeGenomicsGenotypeModels, GeneticPhenotypePlant BreedingPolymorphism, Single Nucleotide

Identifiers

PMID37328527
PMCPMC10276026

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.