Evidence map›Paper›PMID 37327238›Full record

ArticlePLoS computational biology2023

Distinguishing between different percolation regimes in noisy dynamic networks with an application to epileptic seizures.

Xiaojing Zhu, Heather Shappell, Mark A Kramer, Catherine J Chu, Eric D Kolaczyk

Open access · goldAbstract read
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Article in PLoS computational biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.3field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 2 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 2 countries.

Xiaojing ZhuDepartment of Mathematics and Statistics, Boston University, Boston, Massachusetts, United States of America.ORCID 0000-0002-3186-8051
Heather ShappellDepartment of Biostatistics and Data Science, Wake Forest School of Medicine, Winston-Salem, North Carolina, United States of America.
Mark A KramerDepartment of Mathematics and Statistics, Boston University, Boston, Massachusetts, United States of America.
Catherine J ChuMassachusetts General Hospital, Harvard Medical School, Boston, Massachusetts, United States of America.
Eric D KolaczykDepartment of Mathematics and Statistics, McGill University, Montreal, Quebec, Canada.ORCID 0000-0002-3376-626X
Boston University · USHarvard University · USMcGill University · CAWake Forest University · US

Funding

CRCNS: Dynamic network analysis of human seizures for therapeutic interventionR01NS095369 · NINDS · BOSTON UNIVERSITY (CHARLES RIVER CAMPUS) · PI CASH, SYDNEY S, KOLACZYK, ERIC D · 2015 to 2017
$950k
Statistical Methods for Whole-Brain Dynamic Connectivity AnalysisK25EB032903 · NIBIB · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI Heather Marie Shappell · 2023 to 2026
$582k
NIBIB NIH HHS K25 EB032903NINDS NIH HHS R01 NS095369
6 · The paper itself

Abstract

In clinical neuroscience, epileptic seizures have been associated with the sudden emergence of coupled activity across the brain. The resulting functional networks-in which edges indicate strong enough coupling between brain regions-are consistent with the notion of percolation, which is a phenomenon in complex networks corresponding to the sudden emergence of a giant connected component. Traditionally, work has concentrated on noise-free percolation with a monotonic process of network growth, but real-world networks are more complex. We develop a class of random graph hidden Markov models (RG-HMMs) for characterizing percolation regimes in noisy, dynamically evolving networks in the presence of edge birth and edge death. This class is used to understand the type of phase transitions undergone in a seizure, and in particular, distinguishing between different percolation regimes in epileptic seizures. We develop a hypothesis testing framework for inferring putative percolation mechanisms. As a necessary precursor, we present an EM algorithm for estimating parameters from a sequence of noisy networks only observed at a longitudinal subsampling of time points. Our results suggest that different types of percolation can occur in human seizures. The type inferred may suggest tailored treatment strategies and provide new insights into the fundamental science of epilepsy.

Indexed as

EpilepsySeizuresAlgorithmsBrainHumansPhase Transition

Identifiers

PMID37327238
PMCPMC10310035
OpenAlexW4380985995

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.