Evidence map›Paper›PMID 37326883›Full record

ArticlePlanta2023

Function of BrSOC1b gene in flowering regulation of Chinese cabbage and its protein interaction.

Xin Li, Changwei Shen, Ruixiang Chen, Bo Sun, Daohan Li, Xinlei Guo, Chunhui Wu, Nadeem Khan, Bihua Chen, Jingping Yuan

Abstract read
PubMed Publisher
In one paragraph

Article in Planta, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
3.2field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. Gene and Its Promoter Cloning, and Functional Validation ofInternational journal of molecular sciences · 2024
    Article
  4. Orphan geneHorticulture research · 2024
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Xin LiSchool of Horticulture and Landscape Architecture, Henan Institute of Science and Technology, Eastern HuaLan Avenue, Xinxiang City, 453003, Henan Province, China.
Changwei ShenSchool of Resources and Environmental Sciences, Henan Institute of Science and Technology, Xinxiang, 453003, China.
Ruixiang ChenSchool of Horticulture and Landscape Architecture, Henan Institute of Science and Technology, Eastern HuaLan Avenue, Xinxiang City, 453003, Henan Province, China.
Bo SunSchool of Horticulture and Landscape Architecture, Henan Institute of Science and Technology, Eastern HuaLan Avenue, Xinxiang City, 453003, Henan Province, China.
Daohan LiSchool of Horticulture and Landscape Architecture, Henan Institute of Science and Technology, Eastern HuaLan Avenue, Xinxiang City, 453003, Henan Province, China.
Xinlei GuoSchool of Horticulture and Landscape Architecture, Henan Institute of Science and Technology, Eastern HuaLan Avenue, Xinxiang City, 453003, Henan Province, China.
Chunhui WuSchool of Horticulture and Landscape Architecture, Henan Institute of Science and Technology, Eastern HuaLan Avenue, Xinxiang City, 453003, Henan Province, China.
Nadeem KhanGlobal Institute for Food Security, Saskatoon, SK, Canada.
Bihua ChenSchool of Horticulture and Landscape Architecture, Henan Institute of Science and Technology, Eastern HuaLan Avenue, Xinxiang City, 453003, Henan Province, China.
Jingping YuanSchool of Horticulture and Landscape Architecture, Henan Institute of Science and Technology, Eastern HuaLan Avenue, Xinxiang City, 453003, Henan Province, China. jpyuan666@163.com.ORCID http://orcid.org/0000-0001-5842-8489
Henan Institute of Science and Technology · CNGlobal Institute for Water Security · CA

Funding

National Natural Science Foundation of China 32102393the Science and Technology Program of Henan Province 222102110042the Scientific Research Foundation for High-level Talent 103010620001/015the Scientific Research Foundation for High-level Talent 2017034
6 · The paper itself

Abstract

MAIN

conclusionBrSOC1b may promote early flowering of Chinese cabbage by acting on BrAGL9 a, BrAGL9 b, BrAGL2 and BrAGL8 proteins. SOC1 is a flowering signal integrator that acts as a key regulator in controlling plant flowering time. This study focuses on the cloning of the open reading frame of SOC1b (BrSOC1b, Gene ID: Bra000393) gene, and analyzes its structure and phylogenetic relationships. Additionally, various techniques such as vector construction, transgenic technology, virus-induced gene silencing technology, and protein interaction technology were employed to investigate the function of the BrSOC1b gene and its interactions with other proteins. The results indicate that BrSOC1b consists of 642 bp and encodes 213 amino acids. It contains conserved domains such as the MADS domain, K (keratin-like) domain, and SOC1 box. The phylogenetic analysis reveals that BrSOC1b shares the closest homology with BjSOC1 from Brassica juncea. Tissue localization analysis demonstrates that BrSOC1b exhibits the highest expression in the stem during the seedling stage and the highest expression in flowers during the early stage of pod formation. Sub-cellular localization analysis reveals that BrSOC1b is localized in the nucleus and plasma membrane. Furthermore, through genetic transformation of the BrSOC1b gene, it was observed that Arabidopsis thaliana plants expressing BrSOC1b flowered earlier and bolted earlier than wild-type plants. Conversely, Chinese cabbage plants with silenced BrSOC1b exhibited delayed bolting and flowering compared to the control plants. These findings indicate that BrSOC1b promotes early flowering in Chinese cabbage. Yeast two-hybrid and quantitative real-time PCR (qRT-PCR) analyses suggest that BrSOC1b may participate in the regulation of flowering by interacting with BrAGL9a, BrAGL9b, BrAGL2, and BrAGL8 proteins. Overall, this research holds significant implications for the analysis of key genes involved in regulating bolting and flowering in Chinese cabbage, as well as for enhancing germplasm innovation in Chinese cabbage breeding.

Indexed as

ArabidopsisArabidopsis ProteinsFlowersGene Expression Regulation, PlantMADS Domain ProteinsMustard PlantPhylogenyPlant BreedingPlant ProteinsArabidopsis ProteinsMADS Domain ProteinsPlant ProteinsChinese cabbageFlowering timeGenetic transformationProtein interactionSOC1

Identifiers

PMID37326883
OpenAlexW4380869698

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.