ArticleFrontiers in microbiology2023
Managing the deluge of newly discovered plant viruses and viroids: an optimized scientific and regulatory framework for their characterization and risk analysis.
Article in Frontiers in microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.
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Who cites it
9 citing papers in PubMed.
- Sequence analysis of a viral strain isolated for the first time in the UK, clarifies the identity of a novel species of fabavirus.Archives of virology · 2026Article
- Expanding insights into plant rhabdovirus diversity through the discovery of viruses representing 32 putative novel species.Archives of virology · 2026Article
- Article
- Diversity, recombination and misclassification in the family Geminiviridae: Insight from bioinformatics analysis.PloS one · 2026Article
- Wild and globally traded ornamental aquatic plants harbor diverse plant viruses, including notable crop pathogens.Environmental microbiome · 2025Article
- A Virome Scanning of Saffron (Viruses · 2025Article
- Article
- Article
- Revisiting the origins of the Sobemovirus genus: A case for ancient origins of plant viruses.PLoS pathogens · 2024Article
Corrections and comments
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Authors and funding
22 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The advances in high-throughput sequencing (HTS) technologies and bioinformatic tools have provided new opportunities for virus and viroid discovery and diagnostics. Hence, new sequences of viral origin are being discovered and published at a previously unseen rate. Therefore, a collective effort was undertaken to write and propose a framework for prioritizing the biological characterization steps needed after discovering a new plant virus to evaluate its impact at different levels. Even though the proposed approach was widely used, a revision of these guidelines was prepared to consider virus discovery and characterization trends and integrate novel approaches and tools recently published or under development. This updated framework is more adapted to the current rate of virus discovery and provides an improved prioritization for filling knowledge and data gaps. It consists of four distinct steps adapted to include a multi-stakeholder feedback loop. Key improvements include better prioritization and organization of the various steps, earlier data sharing among researchers and involved stakeholders, public database screening, and exploitation of genomic information to predict biological properties.
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Registered trials
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