Evidence map›Paper›PMID 37323834›Full record

ArticleFrontiers in veterinary science2023

The porcine piRNA transcriptome response to Senecavirus a infection.

Chen Wang, Yanxi Chen, Xiwang Yang, Yunsha Du, Zhiwen Xu, Yuancheng Zhou, Xu Yang, Xuetao Wang, Chuanming Zhang, Shuwei Li and 3 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in veterinary science, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
3.2field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 1 country.

Chen WangSouthwest University, College of Veterinary Medicine, Chongqing, China.
Yanxi ChenSouthwest University, College of Veterinary Medicine, Chongqing, China.
Xiwang YangSouthwest University, College of Veterinary Medicine, Chongqing, China.
Yunsha DuSouthwest University, College of Veterinary Medicine, Chongqing, China.
Zhiwen XuAnimal Biotechnology Center, College of Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.
Yuancheng ZhouVeterinary Biologicals Engineering and Technology Research Center of Sichuan Province, Animtech Bioengineering CO., LTD., Chengdu, China.
Xu YangVeterinary Biologicals Engineering and Technology Research Center of Sichuan Province, Animtech Bioengineering CO., LTD., Chengdu, China.
Xuetao WangVeterinary Biologicals Engineering and Technology Research Center of Sichuan Province, Animtech Bioengineering CO., LTD., Chengdu, China.
Chuanming ZhangVeterinary Biologicals Engineering and Technology Research Center of Sichuan Province, Animtech Bioengineering CO., LTD., Chengdu, China.
Shuwei LiVeterinary Biologicals Engineering and Technology Research Center of Sichuan Province, Animtech Bioengineering CO., LTD., Chengdu, China.
Yijun YangDepartment of Infectious and Tropical Diseases, The Second Affiliated Hospital of Hainan Medical University, Haikou, China.
Wenting LiDepartment of Infectious and Tropical Diseases, The Second Affiliated Hospital of Hainan Medical University, Haikou, China.
Xiao LiuSouthwest University, College of Veterinary Medicine, Chongqing, China.
Southwest University · CNSichuan Animal Science Academy · CNHainan Medical University · CNHenan Bioengineering Technology Research Center · CNSichuan Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Senecavirus A (SVA) belongs to the genus Methods: Here, we found the significant differential expression of 173 piRNAs in SVA-infected porcine kidney (PK-15) cells using RNA-seq and 10 significant differentially expressed (DE) piRNAs were further verified by qRT-PCR. Results: GO annotation analysis showed that metabolism, proliferation, and differentiation were significantly activated after SVA infection. Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis revealed that significant DE piRNAs were mainly enriched in AMPK pathway, Rap1 pathway, circadian rhythm and VEGF pathway. It was suggested that piRNAs may regulated antiviral immunity, intracellular homeostasis, and tumor activities during SVA infection. In addition, we found that the expression levels of the major piRNA-generating genes Discussion: This suggests that SVA may affect circadian rhythm and promote apoptosis by inhibiting the major piRNA-generating genes

Indexed as

high-throughput sequencingpig kidney cellsPiwi-interacting RNAs (piRNAs)Senecavirus A (SVA)virus infection

Identifiers

PMID37323834
PMCPMC10265626
OpenAlexW4380142787

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.