Evidence map›Paper›PMID 37322468›Full record

ArticleBMC genomics2023

Transgenerational exposure to ocean acidification impacts the hepatic transcriptome of European sea bass (Dicentrarchus labrax).

Pauline Auffret, Arianna Servili, Anne-Alicia Gonzalez, Marie-Lou Fleury, Felix Christopher Mark, David Mazurais

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 4 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 5 institutions in 2 countries.

Pauline AuffretIFREMER, SEBIMER, Plouzané, 29280, France.
Arianna ServiliIFREMER, PHYTNESS, Univ Brest, CNRS, IRD, LEMAR, Plouzané, 29280, France.
Anne-Alicia GonzalezMGX-Montpellier GenomiX, Univ. Montpellier, CNRS, INSERM, Montpellier, France.
Marie-Lou FleuryIFREMER, PHYTNESS, Univ Brest, CNRS, IRD, LEMAR, Plouzané, 29280, France.
Felix Christopher MarkDepartment of Integrative Ecophysiology, Alfred Wegener Institute Helmholtz Centre for Polar and Marine Research (AWI), 27570, Bremerhaven, Germany.
David MazuraisIFREMER, PHYTNESS, Univ Brest, CNRS, IRD, LEMAR, Plouzané, 29280, France. david.mazurais@ifremer.fr.
Ifremer · FRAlfred-Wegener-Institut Helmholtz-Zentrum für Polar- und Meeresforschung · DELaboratoire des Sciences de l'Environnement Marin · FRUniversité de Bretagne Occidentale · FRUniversité de Montpellier · FR

Funding

Agence Nationale pour la Recherche ANR-10-INBS-09AWI-MARUM-IFREMER AMI Partnership Programme DEADLY TRIOLabexMer ANR-10LABX-0019, OASYS projectthe Deutsche Forschungsgemeinschaft PE 1157/8-1, MA4271/3-1, FITNESS projectthe Ministry of Ecological and Solidarity Transition and the Foundation for Biodiversity Research Ocean Acidification Program, PACIO project
6 · The paper itself

Abstract

Physiological effects of ocean acidification associated with elevated CO2 concentrations in seawater is the subject of numerous studies in teleost fish. While the short time within-generation impact of ocean acidification (OA) on acid-base exchange and energy metabolism is relatively well described, the effects associated with transgenerational exposure to OA are much less known. Yet, the impacts of OA can vary in time with the potential for acclimation or adaptation of a species. Previous studies in our lab demonstrated that transgenerational exposure to OA had extensive effects on the transcriptome of the olfactory epithelium of European sea bass (Dicentrarchus labrax), especially on genes related to ion balance, energy metabolism, immune system, synaptic plasticity, neuron excitability and wiring. In the present study, we complete the previous work by investigating the effect of transgenerational exposure to OA on the hepatic transcriptome of European sea bass. Differential gene expression analysis was performed by RNAseq technology on RNA extracted from the liver of two groups of 18 months F2 juveniles that had been exposed since spawning to the same AO conditions as their parents (F1) to either actual pH or end-of-century predicted pH levels (IPCC RCP8.5), respectively. Here we show that transgenerational exposure to OA significantly impacts the expression of 236 hepatic transcripts including genes mainly involved in inflammatory/immune responses but also in carbohydrate metabolism and cellular homeostasis. Even if this transcriptomic impact is relatively limited compared to what was shown in the olfactory system, this work confirmed that fish transgenerationally exposed to OA exhibit molecular regulation of processes related to metabolism and inflammation. Also, our data expand the up-regulation of a key gene involved in different physiological pathways including calcium homeostasis (i.e. pthr1), which we already observed in the olfactory epithelium, to the liver. Even if our experimental design does not allow to discriminate direct within F2 generation effects from transgenerational plasticity, these results offer the perspective of more functional analyses to determine the potential physiological impact of OA exposure on fish physiology with ecological relevance.

Indexed as

BassTranscriptomeAnimalsHydrogen-Ion ConcentrationLiverOcean AcidificationSeawater

Identifiers

PMID37322468
PMCPMC10273735
OpenAlexW4380870683

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.