Evidence map›Paper›PMID 37322175›Full record

ArticleArchives of virology2023

Developments in the classification and nomenclature of arthropod-infecting large DNA viruses that contain pif genes.

Monique M van Oers, Elisabeth A Herniou, Johannes A Jehle, Peter J Krell, Adly M M Abd-Alla, Bergmann M Ribeiro, David A Theilmann, Zhihong Hu, Robert L Harrison

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in Archives of virology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 8 institutions in 7 countries.

Monique M van OersLaboratory of Virology, Wageningen University and Research, Wageningen, the Netherlands. monique.vanoers@wur.nl.ORCID http://orcid.org/0000-0002-6664-4445
Elisabeth A HerniouInstitut de Recherche sur la Biologie de l'Insecte, UMR 7261, CNRS - University of Tours, 37200, Tours, France.
Johannes A JehleInstitute for Biological Control, Julius Kühn-Institut, 69221, Dossenheim, Germany.
Peter J KrellDepartment of Molecular and Cellular Biology, University of Guelph, Guelph, N1G 2W1, Canada.
Adly M M Abd-AllaJoint FAO/IAEA Programme of Nuclear Techniques in Food and Agriculture, Vienna International Centre, Vienna, Austria.
Bergmann M RibeiroLaboratory of Baculovirus, Cell Biology Department, University of Brasília, Brasília, Brazil.
David A TheilmannSummerland Research and Development Centre, Agriculture and Agri-Food Canada, 4200 Highway 97, Box 5000, Summerland, BC, V0H1Z0, Canada.
Zhihong HuState Key Laboratory of Virology, Wuhan Institute of Virology, Chinese Academy of Sciences, Wuhan, 430071, P. R. China.
Robert L HarrisonInvasive Insect Biocontrol and Behavior Laboratory, USDA-ARS, 10300 Baltimore Avenue, Bldg 007 Barc‑West, Beltsville, MD, 20705, USA.
Agriculture and Agri-Food Canada · CAChinese Academy of Sciences · CNInternational Atomic Energy Agency · ATJulius Kühn-Institut · DEUniversidade de Brasília · BRUniversité de Tours · FRUniversity of Guelph · CAWageningen University & Research · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Viruses of four families of arthropod-specific, large dsDNA viruses (the nuclear arthropod large DNA viruses, or NALDVs) possess homologs of genes encoding conserved components involved in the baculovirus primary infection mechanism. The presence of such homologs encoding per os infectivity factors (pif genes), along with their absence from other viruses and the occurrence of other shared characteristics, suggests a common origin for the viruses of these families. Therefore, the class Naldaviricetes was recently established, accommodating these four families. In addition, within this class, the ICTV approved the creation of the order Lefavirales for three of these families, whose members carry homologs of the baculovirus genes that code for components of the viral RNA polymerase, which is responsible for late gene expression. We further established a system for the binomial naming of all virus species in the order Lefavirales, in accordance with a decision by the ICTV in 2019 to move towards a standardized nomenclature for all virus species. The binomial species names for members of the order Lefavirales consist of the name of the genus to which the species belongs (e.g., Alphabaculovirus), followed by a single epithet that refers to the host species from which the virus was originally isolated. The common names of viruses and the abbreviations thereof will not change, as the format of virus names lies outside the remit of the ICTV.

Indexed as

ArthropodsGranulovirusVirusesAnimalsBaculoviridaeDNA VirusesHost Specificity

Identifiers

PMID37322175
PMCPMC10271883
OpenAlexW4380871067

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.