Evidence map›Paper›PMID 37321219›Full record

ArticleCell2023

Highly multiplexed bioactivity screening reveals human and microbiota metabolome-GPCRome interactions.

Haiwei Chen, Connor E Rosen, Jaime A González-Hernández, Deguang Song, Jan Potempa, Aaron M Ring, Noah W Palm

Open access · greenAbstract read
In one paragraph

Article in Cell, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
10.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 71 citations in OpenAlex.

  1. CD97/Cells · 2026
    Review
  2. Article
  3. Article
  4. Review
  5. Adhesion G protein-coupled receptors.Pharmacological reviews · 2026
    Review
  6. GPR183 contributes to renal macrophage infiltration and fibrosis in kidney injury.American journal of physiology. Renal physiology · 2026
    Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Review
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  13. Article
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  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

Haiwei ChenInstitute of Pediatrics, Children's Hospital of Fudan University, and Shanghai Key Laboratory of Medical Epigenetics, International Co-laboratory of Medical Epigenetics and Metabolism (Ministry of Science and Technology), Institutes of Biomedical Sciences, Shanghai Medical College, Fudan University, Shanghai 200032, China; Department of Immunobiology, Yale University School of Medicine, New Haven, CT, USA. Electronic address: chen_haiwei@fudan.edu.cn.
Connor E RosenDepartment of Immunobiology, Yale University School of Medicine, New Haven, CT, USA.
Jaime A González-HernándezDepartment of Immunobiology, Yale University School of Medicine, New Haven, CT, USA.
Deguang SongDepartment of Immunobiology, Yale University School of Medicine, New Haven, CT, USA.
Jan PotempaDepartment of Microbiology, Faculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, Krakow, Poland; Department of Oral Immunology and Infectious Diseases, University of Louisville School of Dentistry, Louisville, KY, USA.
Aaron M RingDepartment of Immunobiology, Yale University School of Medicine, New Haven, CT, USA.
Noah W PalmDepartment of Immunobiology, Yale University School of Medicine, New Haven, CT, USA. Electronic address: noah.palm@yale.edu.
Yale University · USJagiellonian University · PLShanghai Medical College of Fudan University · CN

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
Microbial Chemical Sensing and Host ResponsesRM1GM141649 · NIGMS · YALE UNIVERSITY · PI Jason Michael Crawford, Caroline Helen Johnson · 2021 to 2026
$9.0M
Bacterial peptidylarginine deiminase, a link between gums and joint diseaseR01DE022597 · NIDCR · UNIVERSITY OF LOUISVILLE · PI POTEMPA, JAN S · 2013 to 2023
$3.7M
A T.fosythia-derived protease inhibitor in periodontal health and diseaseR01DE030939 · NIDCR · UNIVERSITY OF LOUISVILLE · PI Juhi Bagaitkar, JAN S POTEMPA · 2021 to 2026
$2.7M
A forward chemical genetic screen to illuminate the dark matter of the bioactive microbiota metabolomeDP2DK125119 · NIDDK · YALE UNIVERSITY · PI PALM, NOAH WOLCOTT · 2019 to 2019
$2.5M
Impact of dysbiosis on the development of age-related inflammationR01AG068863 · NIA · YALE UNIVERSITY · PI DIXIT, VISHWA DEEP, PALM, NOAH WOLCOTT · 2020 to 2024
$2.2M
IgA-Glycosylation: Mediator of Microbial Homeostasis and Intestinal Health?R21AI137935 · NIAID · YALE UNIVERSITY · PI PALM, NOAH WOLCOTT · 2019 to 2020
$461k
Illuminating immunomodulatory gut microbes in human health and diseaseK22AI123477 · NIAID · YALE UNIVERSITY · PI PALM, NOAH WOLCOTT · 2016 to 2017
$270k
NCATS NIH HHS UL1 TR001863NIAID NIH HHS K22 AI123477NIAID NIH HHS R21 AI137935NIA NIH HHS R01 AG068863NIDCR NIH HHS R01 DE022597NIDCR NIH HHS R01 DE030939NIDDK NIH HHS DP2 DK125119NIGMS NIH HHS RM1 GM141649
6 · The paper itself

Abstract

The human body contains thousands of metabolites derived from mammalian cells, the microbiota, food, and medical drugs. Many bioactive metabolites act through the engagement of G-protein-coupled receptors (GPCRs); however, technological limitations constrain current explorations of metabolite-GPCR interactions. Here, we developed a highly multiplexed screening technology called PRESTO-Salsa that enables simultaneous assessment of nearly all conventional GPCRs (>300 receptors) in a single well of a 96-well plate. Using PRESTO-Salsa, we screened 1,041 human-associated metabolites against the GPCRome and uncovered previously unreported endogenous, exogenous, and microbial GPCR agonists. Next, we leveraged PRESTO-Salsa to generate an atlas of microbiome-GPCR interactions across 435 human microbiome strains from multiple body sites, revealing conserved patterns of cross-tissue GPCR engagement and activation of CD97/ADGRE5 by the Porphyromonas gingivalis protease gingipain K. These studies thus establish a highly multiplexed bioactivity screening technology and expose a diverse landscape of human, diet, drug, and microbiota metabolome-GPCRome interactions.

Indexed as

MicrobiotaReceptors, G-Protein-CoupledAnimalsHumansMammalsMetabolomeReceptors, G-Protein-CoupledG protein-coupled receptor (GPCR)high-throughput screeninghuman metabolomemicrobiomemicrobiota metabolites

Identifiers

PMID37321219
PMCPMC10330796
OpenAlexW4380792871

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.