Evidence map›Paper›PMID 37317657›Full record

ArticleEMBO reports2023

DOT1L bridges transcription and heterochromatin formation at mammalian pericentromeres.

Aushaq B Malla, Haoming Yu, Delaney Farris, Srilekha Kadimi, TuKiet T Lam, Andy L Cox, Zachary D Smith, Bluma J Lesch

Open access · hybridAbstract read
In one paragraph

Article in EMBO reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
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  4. Review
  5. Article
  6. Article
  7. Chromatin structure in totipotent mouse early preimplantation embryos.The Journal of reproduction and development · 2024
    Review
  8. Article
  9. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Aushaq B MallaDepartment of Genetics, Yale School of Medicine, New Haven, CT, USA.ORCID 0000-0001-5733-6523
Haoming YuDepartment of Genetics, Yale School of Medicine, New Haven, CT, USA.ORCID 0000-0001-6231-7183
Delaney FarrisDepartment of Genetics, Yale School of Medicine, New Haven, CT, USA.ORCID 0000-0002-2378-8326
Srilekha KadimiDepartment of Genetics, Yale School of Medicine, New Haven, CT, USA.
TuKiet T LamKeck MS & Proteomics Resource, Yale School of Medicine, New Haven, CT, USA.
Andy L CoxDepartment of Genetics, Yale School of Medicine, New Haven, CT, USA.ORCID 0000-0002-9394-5702
Zachary D SmithDepartment of Genetics, Yale School of Medicine, New Haven, CT, USA.
Bluma J LeschDepartment of Genetics, Yale School of Medicine, New Haven, CT, USA.ORCID 0000-0002-6689-0240
Yale University · USYale Cancer Center · USW. M. Keck Foundation · US

Funding

GENETICS AND GENOMICS OF HUMAN DISEASET32HD007149 · NICHD · YALE UNIVERSITY · PI James P Noonan · 1985 to 2026
$8.2M
Epigenetic and environmental impact on early embryonic developmentDP2HD108774 · NICHD · YALE UNIVERSITY · PI SMITH, ZACHARY DYLAN · 2021 to 2024
$2.5M
Germline Utx mutation as a model for transgenerational epigenetic inheritanceR01HD098128 · NICHD · YALE UNIVERSITY · PI LESCH, BLUMA J · 2020 to 2024
$2.0M
6500 QTrap Mass Spectrometer for Yale UniversityS10OD018034 · OD · YALE UNIVERSITY · PI MANE, SHRIKANT M · 2014 to 2014
$514k
NICHD NIH HHS DP2 HD108774NICHD NIH HHS DP2HD108774NICHD NIH HHS R01 HD098128NICHD NIH HHS R01HD098128NICHD NIH HHS T32 HD007149NIH HHS S10 OD018034NIH HHS S10OD018034
6 · The paper itself

Abstract

Repetitive DNA elements are packaged in heterochromatin, but many require bursts of transcription to initiate and maintain long-term silencing. The mechanisms by which these heterochromatic genome features are transcribed remain largely unknown. Here, we show that DOT1L, a conserved histone methyltransferase that modifies lysine 79 of histone H3 (H3K79), has a specialized role in transcription of major satellite repeats to maintain pericentromeric heterochromatin and genome stability. We find that H3K79me3 is selectively enriched relative to H3K79me2 at repetitive elements in mouse embryonic stem cells (mESCs), that DOT1L loss compromises pericentromeric satellite transcription, and that this activity involves possible coordination between DOT1L and the chromatin remodeler SMARCA5. Stimulation of transcript production from pericentromeric repeats by DOT1L participates in stabilization of heterochromatin structures in mESCs and cleavage-stage embryos and is required for preimplantation viability. Our findings uncover an important role for DOT1L as a bridge between transcriptional activation of repeat elements and heterochromatin stability, advancing our understanding of how genome integrity is maintained and how chromatin state is set up during early development.

Indexed as

HeterochromatinMethyltransferasesAnimalsChromatinChromatin Assembly and DisassemblyHistone-Lysine N-MethyltransferaseHistone MethyltransferasesHistonesMammalsMiceChromatinDot1l protein, mouseHeterochromatinHistone-Lysine N-MethyltransferaseHistone MethyltransferasesHistonesMethyltransferasesDOT1Lembryoembryonic stem cellsheterochromatinmajor satellite

Identifiers

PMID37317657
PMCPMC10398668
OpenAlexW4380730637

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.