Evidence map›Paper›PMID 37316742›Full record

ArticleAntonie van Leeuwenhoek2023

The α-(1,3)-glucan synthase gene agsE impacts the secretome of Aspergillus niger.

Jun Lyu, Costanza Torchia, Harm Post, Juan P Moran Torres, A F Maarten Altelaar, Hans de Cock, Han A B Wösten

Open access · hybridAbstract read
In one paragraph

Article in Antonie van Leeuwenhoek, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.9field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Jun LyuMicrobiology, Utrecht University, Padualaan 8, 3584, CH, Utrecht, The Netherlands.
Costanza TorchiaMicrobiology, Utrecht University, Padualaan 8, 3584, CH, Utrecht, The Netherlands.
Harm Post
Juan P Moran TorresMicrobiology, Utrecht University, Padualaan 8, 3584, CH, Utrecht, The Netherlands.
A F Maarten AltelaarBiomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Padualaan 8, 3584, CH, Utrecht, The Netherlands.
Hans de CockMicrobiology, Utrecht University, Padualaan 8, 3584, CH, Utrecht, The Netherlands.
Han A B WöstenMicrobiology, Utrecht University, Padualaan 8, 3584, CH, Utrecht, The Netherlands. h.a.b.wosten@uu.nl.ORCID http://orcid.org/0000-0002-0399-3648
Utrecht University · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Aspergillus niger is widely used as a cell factory for the industrial production of enzymes. Previously, it was shown that deletion of α-1-3 glucan synthase genes results in smaller micro-colonies in liquid cultures of Aspergillus nidulans. Also, it has been shown that small wild-type Aspergillus niger micro-colonies secrete more protein than large mirco-colonies. We here assessed whether deletion of the agsC or agsE α-1-3 glucan synthase genes results in smaller A. niger micro-colonies and whether this is accompanied by a change in protein secretion. Biomass formation was not affected in the deletion strains but pH of the culture medium had changed from 5.2 in the case of the wild-type to 4.6 and 6.4 for ΔagsC and ΔagsE, respectively. The diameter of the ΔagsC micro-colonies was not affected in liquid cultures. In contrast, diameter of the ΔagsE micro-colonies was reduced from 3304 ± 338 µm to 1229 ± 113 µm. Moreover, the ΔagsE secretome was affected with 54 and 36 unique proteins with a predicted signal peptide in the culture medium of MA234.1 and the ΔagsE, respectively. Results show that these strains have complementary cellulase activity and thus may have complementary activity on plant biomass degradation. Together, α-1-3 glucan synthesis (in)directly impacts protein secretion in A. niger.

Indexed as

Aspergillus nigerSecretomeFungal ProteinsGlucosyltransferasesFungal Proteinsglucan synthaseGlucosyltransferasesAspergillus nigerCell wallColony morphologyFungusSecretomeα-(1,3)-glucan

Identifiers

PMID37316742
PMCPMC10371888
OpenAlexW4380685703

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.