Evidence map›Paper›PMID 37316548›Full record

ArticleScientific data2023

A draft genome assembly of reef-building octocoral Heliopora coerulea.

Jack Chi-Ho Ip, Ming-Hay Ho, Benny K K Chan, Jian-Wen Qiu

Open access · goldAbstract readDataset
In one paragraph

Article in Scientific data, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 15 citations in OpenAlex.

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  5. Mitogenomic characterization and phylogenetic positioning ofMitochondrial DNA. Part B, Resources · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Jack Chi-Ho IpDepartment of Biology, Hong Kong Baptist University, Kowloon Tong, Hong Kong. jackip@hkbu.edu.hk.ORCID 0000-0002-4477-7351
Ming-Hay HoBiodiversity Research Center, Academia Sinica, Taipei, Taiwan.
Benny K K ChanBiodiversity Research Center, Academia Sinica, Taipei, Taiwan.
Jian-Wen QiuDepartment of Biology, Hong Kong Baptist University, Kowloon Tong, Hong Kong. qiujw@hkbu.edu.hk.ORCID 0000-0002-1541-9627
Biodiversity Research Center, Academia Sinica · TWHong Kong Baptist University · HK

Funding

Hong Kong Baptist University (HKBU) 162780
6 · The paper itself

Abstract

Coral reefs are under existential threat from climate change and anthropogenic impacts. Genomic studies have enhanced our knowledge of resilience and responses of some coral species to environmental stress, but reference genomes are lacking for many coral species. The blue coral Heliopora is the only reef-building octocoral genus and exhibits optimal growth at a temperature close to the bleaching threshold of scleractinian corals. Local and high-latitude expansions of Heliopora coerulea were reported in the last decade, but little is known about the molecular mechanisms underlying its thermal resistance. We generated a draft genome of H. coerulea with an assembled size of 429.9 Mb, scaffold N50 of 1.42 Mb and BUSCO completeness of 94.9%. The genome contains 239.1 Mb repetitive sequences, 27,108 protein coding genes, 6,225 lncRNAs, and 79 miRNAs. This reference genome provides a valuable resource for in-depth studies on the adaptive mechanisms of corals under climate change and the evolution of skeleton in cnidarian.

Indexed as

AnthozoaAnimalsAnthropogenic EffectsClimate ChangeCoral ReefsExistentialismGenome

Identifiers

PMID37316548
PMCPMC10267220
OpenAlexW4380589152

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.