Evidence map›Paper›PMID 37315186›Full record

ArticleMicroscopy (Oxford, England)2024

Spatial frequency-based correction of the spherical aberration in living brain imaging.

Aoi Gohma, Naoya Adachi, Yasuo Yonemaru, Daiki Horiba, Kaori Higuchi, Daisuke Nishiwaki, Eiji Yokoi, Yoshihiro Ue, Atsushi Miyawaki, Hiromu Monai

Abstract read
In one paragraph

Article in Microscopy (Oxford, England), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Aoi GohmaDepartment of Biological Sciences, Graduate School of Humanities and Sciences, Ochanomizu University, Ohtsuka, Bunkyo-ku, Tokyo 112-8610, Japan.
Naoya AdachiRIKEN Center for Brain Science-Evident Open Collaboration Center, Center for Brain Science (CBS), RIKEN, 2-1, Hirosawa, Wako-shi, Saitama 351-0106, Japan.
Yasuo YonemaruRIKEN Center for Brain Science-Evident Open Collaboration Center, Center for Brain Science (CBS), RIKEN, 2-1, Hirosawa, Wako-shi, Saitama 351-0106, Japan.
Daiki HoribaRIKEN Center for Brain Science-Evident Open Collaboration Center, Center for Brain Science (CBS), RIKEN, 2-1, Hirosawa, Wako-shi, Saitama 351-0106, Japan.
Kaori HiguchiRIKEN Center for Brain Science-Evident Open Collaboration Center, Center for Brain Science (CBS), RIKEN, 2-1, Hirosawa, Wako-shi, Saitama 351-0106, Japan.
Daisuke NishiwakiRIKEN Center for Brain Science-Evident Open Collaboration Center, Center for Brain Science (CBS), RIKEN, 2-1, Hirosawa, Wako-shi, Saitama 351-0106, Japan.
Eiji YokoiRIKEN Center for Brain Science-Evident Open Collaboration Center, Center for Brain Science (CBS), RIKEN, 2-1, Hirosawa, Wako-shi, Saitama 351-0106, Japan.
Yoshihiro UeRIKEN Center for Brain Science-Evident Open Collaboration Center, Center for Brain Science (CBS), RIKEN, 2-1, Hirosawa, Wako-shi, Saitama 351-0106, Japan.
Atsushi MiyawakiRIKEN Center for Brain Science-Evident Open Collaboration Center, Center for Brain Science (CBS), RIKEN, 2-1, Hirosawa, Wako-shi, Saitama 351-0106, Japan.
Hiromu MonaiDepartment of Biological Sciences, Graduate School of Humanities and Sciences, Ochanomizu University, Ohtsuka, Bunkyo-ku, Tokyo 112-8610, Japan.ORCID 0000-0002-6975-7218

Funding

Japan Science and Technology Agency FOREST Program (JPMJFR204G)Japan Society for the Promotion of Science KAKENHI (18K14859) KAKENHI (20K15895)Kao Research Council for the Study of Healthcare ScienceResearch Foundation for Opto-Science and TechnologyTERUMO LIFE SCIENCE FOUNDATIONThe Japan Association for Chemical Innovation
6 · The paper itself

Abstract

Optical errors, including spherical aberrations, hinder high-resolution imaging of biological samples due to biochemical components and physical properties. We developed the Deep-C microscope system to achieve aberration-free images, employing a motorized correction collar and contrast-based calculations. However, current contrast-maximization techniques, such as the Brenner gradient method, inadequately assess specific frequency bands. The Peak-C method addresses this issue, but its arbitrary neighbor selection and susceptibility to the noise limit its effectiveness. In this paper, we emphasize the importance of a broad spatial frequency range for accurate spherical aberration correction and propose Peak-F. This spatial frequency-based system utilizes a fast Fourier transform as a bandpass filter. This approach overcomes Peak-C's limitations and comprehensively covers the low-frequency domain of image spatial frequencies.

Indexed as

BrainMicroscopyNeuroimagingcorrection collarobjective lensrefractive indexspherical aberration

Identifiers

PMID37315186
PMCPMC10849036

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.