Evidence map›Paper›PMID 37311875›Full record

ArticleArchives of virology2023

Molecular diversity of yam virus Y and identification of banana mild mosaic virus isolates infecting yam (Dioscorea spp.).

Mame Boucar Diouf, Sébastien Guyader, Marie-Michelle Nopoly, Olyvia Gaspard, Denis Filloux, Thierry Candresse, Armelle Marais, Pierre-Yves Teycheney, Marie Umber

Open access · hybridAbstract read
In one paragraph

Article in Archives of virology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
1.2field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 4 countries.

Mame Boucar DioufINRAE, UR ASTRO, 97170, Petit‑Bourg, Guadeloupe, France.
Sébastien GuyaderINRAE, UR ASTRO, 97170, Petit‑Bourg, Guadeloupe, France.
Marie-Michelle NopolyINRAE, UR ASTRO, 97170, Petit‑Bourg, Guadeloupe, France.
Olyvia GaspardINRAE, UR ASTRO, 97170, Petit‑Bourg, Guadeloupe, France.
Denis FillouxCIRAD, UMR PHIM, 34090, Montpellier, France.
Thierry CandresseINRAE, Univ. Bordeaux, UMR BFP, CS20032, 33882, Villenave d'Ornon Cedex, France.
Armelle MaraisINRAE, Univ. Bordeaux, UMR BFP, CS20032, 33882, Villenave d'Ornon Cedex, France.
Pierre-Yves TeycheneyCIRAD, UMR PVBMT, 97410, Saint-Pierre, La Réunion, France.
Marie UmberINRAE, UR ASTRO, 97170, Petit‑Bourg, Guadeloupe, France. marie.umber@inrae.fr.ORCID http://orcid.org/0000-0002-5759-0748
Centre de Coopération Internationale en Recherche Agronomique pour le Développement · FRInstitut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement · FRUniversité de Bordeaux · FRInstitut National de la Recherche Agronomique · MA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Two members of the family Betaflexiviridae associated with yam (Dioscorea spp.) have been described so far: yam latent virus (YLV) and yam virus Y (YVY). However, their geographical distribution and molecular diversity remain poorly documented. Using a nested RT-PCR assay, we detected YVY in D. alata, D. bulbifera, D. cayenensis, D. rotundata, and D. trifida in Guadeloupe, and in D. rotundata in Côte d'Ivoire, thus extending the known host range of this virus and geographical distribution. Using amplicon sequencing, we determined that the molecular diversity of YVY in the yam samples analyzed in this work ranged between 0.0 and 29.1% and that this diversity is partially geographically structured. We also identified three isolates of banana mild mosaic virus (BanMMV) infecting D. alata in Guadeloupe, providing the first evidence for BanMMV infection in yam.

Indexed as

CarlavirusDioscoreaFlexiviridaeMosaic VirusesMusa

Identifiers

PMID37311875
PMCPMC10264530
OpenAlexW4380446057

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.