Evidence map›Paper›PMID 37310980›Full record

ArticlePloS one2023

Recombinant expression and preliminary characterization of Peptidyl-prolyl cis/trans-isomerase Rrd1 from Saccharomyces cerevisiae.

Mohd Kashif, Ahad Amer Alsaiari, Bhupendra Kumar, Mohd Asalam, Mohammad Imran Khan, Abrar Ahmad, Rayees Ahmad Lone, Mazen Almehmadi, Mazin A Zamzami, Mohd Sohail Akhtar

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Article in PloS one, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

10 authors.

Mohd KashifCenter for Plant Molecular Biology and Biotechnology Division, CSIR-National Botanical Research Institute, Lucknow, Uttar Pradesh, India.ORCID 0000-0002-0124-052X
Ahad Amer AlsaiariDepartment of Clinical Laboratory Sciences, College of Applied Medical Sciences, Taif University, Taif, Saudi Arabia.
Bhupendra KumarCenter for Plant Molecular Biology and Biotechnology Division, CSIR-National Botanical Research Institute, Lucknow, Uttar Pradesh, India.
Mohd AsalamCSIR-Central Drug Research Institute Sector 10, Jankipuram Extension, Lucknow, Uttar Pradesh, India.
Mohammad Imran KhanDepartment of Biochemistry, King Abdulaziz University, Jeddah, Saudi Arabia.
Abrar AhmadDepartment of Biochemistry, King Abdulaziz University, Jeddah, Saudi Arabia.
Rayees Ahmad LoneCenter for Plant Molecular Biology and Biotechnology Division, CSIR-National Botanical Research Institute, Lucknow, Uttar Pradesh, India.
Mazen AlmehmadiDepartment of Clinical Laboratory Sciences, College of Applied Medical Sciences, Taif University, Taif, Saudi Arabia.
Mazin A ZamzamiDepartment of Biochemistry, King Abdulaziz University, Jeddah, Saudi Arabia.
Mohd Sohail AkhtarCSIR-Central Drug Research Institute Sector 10, Jankipuram Extension, Lucknow, Uttar Pradesh, India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sacchromycescerevisiae Peptidyl-prolylcis/trans-isomerase Rrd1 has been linked to DNA repair, bud morphogenesis, advancement of the G1 phase, DNA replication stress, microtubule dynamics and is also necessary for the quick decrease in Sgs1p levels in response to rapamycin. In present study, Rrd1 gene was amplified by standard PCR and subsequently cloned downstream to bacteriophage T7 inducible promoter and lac operator of expression vector pET21d(+). Additionally, immobilized metal affinity chromatography (IMAC) was used to purify the protein upto its homogeneity, and its homogeneous purity was further confirmed through western blotting. Size exclusion chromatography implies that Rrd1 is existing as monomer in its natural state. Foldwise Rrd1 protein belongs to PTPA-like protein superfamily. Rrd1 showed characteristic negative minima at 222 and 208 nm represent protein typically acquired α helix in the far-UV CD spectra. Fluorescence spectra showed properly folded tertiary structures of Rrd1 at physiological conditions. Rrd1protein can be identified from different species using a fingerprint created by PIPSA analysis. The protein's abundance could aid in its crystallization, biophysical characterization and identification of other-interacting partners of Rrd1 protein.

Indexed as

Peptidylprolyl IsomeraseSaccharomyces cerevisiaeBacteriophage T7BiophysicsBlotting, WesternPeptidylprolyl Isomerase

Identifiers

PMID37310980
PMCPMC10263354

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