Evidence map›Paper›PMID 37310210›Full record

ArticleApplied and environmental microbiology2023

Socializing at the Air-Liquid Interface: a Functional Genomic Analysis on Biofilm-Related Genes during Pellicle Formation by Escherichia coli and Its Interaction with Aeromonas australiensis.

Zhaohui S Xu, Tongbo Zhu, Zhiying Wang, Xianqin Yang, Michael G Gänzle

Open access · greenAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

  1. Diversification of biofilm architecture among freshwaterApplied and environmental microbiology · 2026
    Article
  2. Article
  3. Article
  4. Morphogenesis and mechanical properties ofCurrent research in microbial sciences · 2025
    Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Zhaohui S XuUniversity of Alberta, Department of Agricultural, Food and Nutritional Science, Edmonton, Alberta, Canada.
Tongbo ZhuUniversity of Alberta, Department of Agricultural, Food and Nutritional Science, Edmonton, Alberta, Canada.
Zhiying WangUniversity of Alberta, Department of Agricultural, Food and Nutritional Science, Edmonton, Alberta, Canada.
Xianqin YangAgriculture and Agri-Food Canada, Lacombe, Alberta, Canada.
Michael G GänzleUniversity of Alberta, Department of Agricultural, Food and Nutritional Science, Edmonton, Alberta, Canada.ORCID 0000-0003-0972-928X
University of Alberta · CAAgriculture and Agri-Food Canada · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pellicles are biofilms that form at the air-liquid interface. We demonstrated that specific strains of Escherichia coli formed pellicles in single cultures when cocultured with Carnobacterium maltaromaticum and E. coli O157:H7 but not with Aeromonas australiensis. Therefore, a combination of comparative genomic, mutational, and transcriptome analyses were applied to identify the unique genes in pellicle formation and investigate gene regulation under different growth phases. Here, we report that pellicle-forming strains do not harbor unique genes relative to non-pellicle-forming strains; however, the expression level of biofilm-related genes differed, especially for the genes encoding curli. Further, the regulatory region of curli biosynthesis is phylogenetically different among pellicle- and non-pellicle-forming strains. The disruption on modified cellulose and regulatory region of curli biosynthesis abolished pellicle formation in strains of E. coli. Besides, the addition of quorum sensing molecules (C

Indexed as

AeromonasEscherichia coli O157BiofilmsCelluloseGenomicsCelluloseAeromonasbiofilmscellulosecurliEscherichia colimultispeciespelliclesquorum sensing

Identifiers

PMID37310210
PMCPMC10370300
OpenAlexW4380423302

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.