Evidence map›Paper›PMID 37309893›Full record

ArticleThe Journal of chemical physics2023

Inhibition of vibrational energy flow within an aromatic scaffold via heavy atom effect.

Majid Hassani, Christopher J Mallon, Judith N Monzy, Andrew J Schmitz, Scott H Brewer, Edward E Fenlon, Matthew J Tucker

Abstract read
In one paragraph

Article in The Journal of chemical physics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Majid HassaniDepartment of Chemistry, University of Nevada, Reno, Nevada 89557, USA.ORCID 0009-0002-9127-0171
Christopher J MallonDepartment of Chemistry, University of Nevada, Reno, Nevada 89557, USA.
Judith N MonzyDepartment of Chemistry, Franklin & Marshall College, Lancaster, Pennsylvania 17604-3003, USA.ORCID 0000-0003-0497-7866
Andrew J SchmitzDepartment of Chemistry, University of Nevada, Reno, Nevada 89557, USA.
Scott H BrewerDepartment of Chemistry, Franklin & Marshall College, Lancaster, Pennsylvania 17604-3003, USA.ORCID 0000-0002-0287-2836
Edward E FenlonDepartment of Chemistry, Franklin & Marshall College, Lancaster, Pennsylvania 17604-3003, USA.ORCID 0000-0002-6701-8163
Matthew J TuckerDepartment of Chemistry, University of Nevada, Reno, Nevada 89557, USA.ORCID 0000-0001-9724-4455

Funding

Use of Vibrational Reporters to Measure Dynamics and Distances in RNA and ProteinsR15GM093330 · NIGMS · FRANKLIN AND MARSHALL COLLEGE · PI BREWER, SCOTT H, FENLON, EDWARD EMMETT · 2010 to 2024
$1.3M
NIGMS NIH HHS R15 GM093330
6 · The paper itself

Abstract

The regulation of intramolecular vibrational energy redistribution (IVR) to influence energy flow within molecular scaffolds provides a way to steer fundamental processes of chemistry, such as chemical reactivity in proteins and design of molecular diodes. Using two-dimensional infrared (2D IR) spectroscopy, changes in the intensity of vibrational cross-peaks are often used to evaluate different energy transfer pathways present in small molecules. Previous 2D IR studies of para-azidobenzonitrile (PAB) demonstrated that several possible energy pathways from the N3 to the cyano-vibrational reporters were modulated by Fermi resonance, followed by energy relaxation into the solvent [Schmitz et al., J. Phys. Chem. A 123, 10571 (2019)]. In this work, the mechanisms of IVR were hindered via the introduction of a heavy atom, selenium, into the molecular scaffold. This effectively eliminated the energy transfer pathway and resulted in the dissipation of the energy into the bath and direct dipole-dipole coupling between the two vibrational reporters. Several structural variations of the aforementioned molecular scaffold were employed to assess how each interrupted the energy transfer pathways, and the evolution of 2D IR cross-peaks was measured to assess the changes in the energy flow. By eliminating the energy transfer pathways through isolation of specific vibrational transitions, through-space vibrational coupling between an azido (N3) and a selenocyanato (SeCN) probe is facilitated and observed for the first time. Thus, the rectification of this molecular circuitry is accomplished through the inhibition of energy flow using heavy atoms to suppress the anharmonic coupling and, instead, favor a vibrational coupling pathway.

Identifiers

PMID37309893
PMCPMC10275622

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.