ArticleMolecular breeding : new strategies in plant improvement2021
Exploring genetic architecture for pod-related traits in soybean using image-based phenotyping.
Article in Molecular breeding : new strategies in plant improvement, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.
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9 citing papers in PubMed, 21 citations in OpenAlex.
- Genetic Dissection of Image-Derived Pod-Related Traits in an Interspecific Soybean RIL Population.Plants (Basel, Switzerland) · 2026Article
- Image-based high-throughput phenotyping enables genetic analyses of pod morphological traits in mungbean (Vigna radiata (L.) R. Wilczek).G3 (Bethesda, Md.) · 2026Article
- Pod-pose : an efficient top-down keypoint detection model for fine-grained pod phenotyping in mature soybean.Plant methods · 2025Article
- Automatic Measurement of Seed Geometric Parameters Using a Handheld Scanner.Sensors (Basel, Switzerland) · 2024Article
- Genetic Analysis of Soybean Flower Size Phenotypes Based on Computer Vision and Genome-Wide Association Studies.International journal of molecular sciences · 2024Article
- Natural and artificial selection of multiple alleles revealed through genomic analyses.Frontiers in genetics · 2023Article
- Multi-locus genome-wide association studies reveal genomic regions and putative candidate genes associated with leaf spot diseases in African groundnut (Frontiers in plant science · 2022Article
- Characterization of Root System Architecture Traits in Diverse Soybean Genotypes Using a Semi-Hydroponic System.Plants (Basel, Switzerland) · 2021Article
- Uncovering the Novel QTLs and Candidate Genes of Salt Tolerance in Rice with Linkage Mapping, RTM-GWAS, and RNA-seq.Rice (New York, N.Y.) · 2021Article
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Authors and funding
13 authors at 3 institutions in 3 countries.
Funding
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Abstract
Mature pod color (PC) and pod size (PS) served as important characteristics are used in the soybean breeding programs. However, manual phenotyping of such complex traits is time-consuming, laborious, and expensive for breeders. Here, we collected pod images from two different populations, namely, a soybean association panel (SAP) consisting of 187 accessions and an inter-specific recombinant inbred line (RIL) population containing 284 RILs. An image-based phenotyping method was developed and used to extract the pod color- and size-related parameters from images. Genome-wide association study (GWAS) and linkage mapping were performed to decipher the genetic control of pod color- and size-related traits across 2 successive years. Both populations exhibited wide phenotypic variations and continuous distribution in pod color- and size-related traits, indicating quantitative polygenic inheritance of these traits. GWAS and linkage mapping approaches identified the two major quantitative trait loci (QTL) underlying the pod color parameters, i.e., Supplementary Information: The online version contains supplementary material available at 10.1007/s11032-021-01223-2.
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