Evidence map›Paper›PMID 37308669›Full record

ArticleScientific reports2023

Transcriptome and metabonomics combined analysis revealed the energy supply mechanism involved in fruiting body initiation in Chinese cordyceps.

Li He, Fang Xie, Gang Zhou, Zhao He Chen, Jing Yi Wang, Cheng Gang Wang

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 15 citations in OpenAlex.

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  11. Genome Analysis ofInternational journal of molecular sciences · 2024
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  13. Rapid discrimination between wild and cultivatedCurrent research in food science · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Li HeSchool of Biological and Pharmaceutical Engineering, Lanzhou Jiaotong University, Lanzhou, Gansu, People's Republic of China. heli_169092@163.com.
Fang XieSchool of Biological and Pharmaceutical Engineering, Lanzhou Jiaotong University, Lanzhou, Gansu, People's Republic of China. xfrankf@163.com.
Gang ZhouSchool of Biological and Pharmaceutical Engineering, Lanzhou Jiaotong University, Lanzhou, Gansu, People's Republic of China.
Zhao He ChenSchool of Biological and Pharmaceutical Engineering, Lanzhou Jiaotong University, Lanzhou, Gansu, People's Republic of China.
Jing Yi WangSchool of Biological and Pharmaceutical Engineering, Lanzhou Jiaotong University, Lanzhou, Gansu, People's Republic of China.
Cheng Gang WangSchool of Biological and Pharmaceutical Engineering, Lanzhou Jiaotong University, Lanzhou, Gansu, People's Republic of China.
Lanzhou Jiaotong University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chinese cordyceps was one of most valuable traditional Chinese medicine fungi. To elucidate the molecular mechanisms related to energy supply mechanism involved in the initiation and formation of primordium in Chinese cordyceps, we performed the integrated metabolomic and transcriptomic analyses of it at pre-primordium period, primordium germination period and after-primordium period, respectively. Transcriptome analysis showed that many genes related to 'starch and sucrose metabolism', 'fructose and mannose metabolism', 'linoleic acid metabolism', 'fatty acids degradation' and 'glycerophospholipid metabolism' were highly up-regulated at primordium germination period. Metabolomic analysis showed many metabolites regulated by these genes in these metabolism pathways were also markedly accumulated at this period. Consequently, we inferred that carbohydrate metabolism and β-oxidation pathway of palmitic acid and linoleic acid worked cooperatively to generate enough acyl-CoA, and then entered TCA cycle to provide energy for fruiting body initiation. Overall, our finding provided important information for further exploring the energy metabolic mechanisms of realizing the industrialization of Chinese cordyceps artificial cultivation.

Indexed as

CordycepsTranscriptomeGene Expression ProfilingLinoleic AcidMetabolomicsLinoleic Acid

Identifiers

PMID37308669
PMCPMC10261108
OpenAlexW4380323937

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.