Evidence map›Paper›PMID 37308466›Full record

ArticleInfection control and hospital epidemiology2023

Whole-genome sequencing rule-out of suspected hospital-onset

Victoria T Chu, Saba Nafees, Eric Waltari, Nicole McNeil, Carolyn Caughell, Estella Sanchez-Guerrero, Lusha Wang, Kim Stanley, Gail Cunningham, Joan Wong and 7 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Infection control and hospital epidemiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Victoria T Chu *Division of Infectious Diseases and Global Health, Department of Pediatrics, University of California-San Francisco, San Francisco, California.ORCID 0000-0002-7480-965X
Saba Nafees *Chan Zuckerberg Biohub, San Francisco, California.ORCID 0000-0002-3292-7703
Eric Waltari *Chan Zuckerberg Biohub, San Francisco, California.ORCID 0000-0001-6930-9645
Nicole McNeilDepartment of Hospital Epidemiology and Infection Prevention, University of California-San Francisco, San Francisco, California.ORCID 0000-0002-2206-5513
Carolyn CaughellDepartment of Hospital Epidemiology and Infection Prevention, University of California-San Francisco, San Francisco, California.
Estella Sanchez-GuerreroDivision of Infectious Diseases, Department of Medicine, University of California-San Francisco, San Francisco, California.
Lusha WangDepartment of Hospital Epidemiology and Infection Prevention, University of California-San Francisco, San Francisco, California.
Kim StanleyDepartment of Hospital Epidemiology and Infection Prevention, University of California-San Francisco, San Francisco, California.
Gail CunninghamDepartment of Laboratory Medicine, University of California-San Francisco, San Francisco, California.
Joan WongChan Zuckerberg Biohub, San Francisco, California.ORCID 0000-0002-7849-6320
Maíra PhelpsChan Zuckerberg Biohub, San Francisco, California.
Cristina M TatoChan Zuckerberg Biohub, San Francisco, California.
Steve MillerIllumina, Inc, Foster City, California.
Joseph L DeRisiChan Zuckerberg Biohub, San Francisco, California.
Deborah S YokoeDepartment of Hospital Epidemiology and Infection Prevention, University of California-San Francisco, San Francisco, California.
Lynn Ramirez-AvilaDivision of Infectious Diseases and Global Health, Department of Pediatrics, University of California-San Francisco, San Francisco, California.
Charles R LangelierChan Zuckerberg Biohub, San Francisco, California.ORCID 0000-0002-6708-4646

Funding

BIOLOGY OF INFECTIOUS DISEASES TRAINING PROGRAMT32AI007641 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI MATTHEW G DORSEY · 2000 to 2026
$6.9M
NIAID NIH HHS T32 AI007641
6 · The paper itself

Abstract

Two independent temporal-spatial clusters of hospital-onset

Indexed as

Genome, BacterialRhizopusDisease OutbreaksHospitalsHumansPhylogeny

Identifiers

PMID37308466
PMCPMC10755156

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.