Evidence map›Paper›PMID 37307480›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2023

MBD2a-NuRD binds to the methylated γ-globin gene promoter and uniquely forms a complex required for silencing of HbF expression.

Shengzhe Shang, Xia Li, Alexander Azzo, Tin Truong, Mikhail Dozmorov, Charles Lyons, Asit K Manna, David C Williams, Gordon D Ginder

Open access · hybridAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
15.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 46 citations in OpenAlex.

  1. Article
  2. Review
  3. Mechanisms of Globin Gene Regulation in Mammals.Annual review of genetics · 2025
    Review
  4. Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Review
  10. The role(s) of NF-Y in development and differentiation.Cell death and differentiation · 2025
    Review
  11. Basic Epigenetic Mechanisms.Sub-cellular biochemistry · 2025
    Review
  12. Review
  13. Transcriptional regulators of fetal hemoglobin.Hematology, transfusion and cell therapy · 2024
    Review
  14. Article
  15. Review
  16. Article
  17. Review
  18. Article
  19. Review
  20. Transcriptional Repressor BCL11A in Erythroid Cells.Advances in experimental medicine and biology · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Shengzhe ShangMassey Cancer Center, Virginia Commonwealth University, Richmond, VA 23060.ORCID 0000-0002-0919-1208
Xia LiMassey Cancer Center, Virginia Commonwealth University, Richmond, VA 23060.
Alexander AzzoCenter for Clinical and Translational Research, PhD Program in Cancer and Molecular Medicine, Virginia Commonwealth University, Richmond, VA 23060.
Tin TruongMassey Cancer Center, Virginia Commonwealth University, Richmond, VA 23060.
Mikhail DozmorovDepartment of Biostatistics, Virginia Commonwealth University, Richmond, VA 23060.ORCID 0000-0002-0086-8358
Charles LyonsMassey Cancer Center, Virginia Commonwealth University, Richmond, VA 23060.ORCID 0009-0004-5913-377X
Asit K MannaDepartment of Pathology and Laboratory Medicine, University of North Carolina, Chapel Hill, NC 27599.ORCID 0000-0003-0922-9381
David C WilliamsDepartment of Pathology and Laboratory Medicine, University of North Carolina, Chapel Hill, NC 27599.ORCID 0000-0002-6536-4038
Gordon D GinderMassey Cancer Center, Virginia Commonwealth University, Richmond, VA 23060.ORCID 0000-0001-9875-3198
Virginia Commonwealth University · USUniversity of North Carolina at Chapel Hill · US

Funding

Virology Research Program (Program 4)P30CA016086 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Deborah F. Tate · 1985 to 2026
$201.5M
Virus Vector Shared ResourceP30CA016059 · NCI · VIRGINIA COMMONWEALTH UNIVERSITY · PI Keri R Maher · 1985 to 2026
$51.0M
The Role of the MBD2-NuRD Complex in Gamma-Globin Gene SilencingR01DK115563 · NIDDK · VIRGINIA COMMONWEALTH UNIVERSITY · PI GINDER, GORDON D, WILLIAMS, DAVID COLLIN · 2018 to 2025
$6.3M
NCI NIH HHS P30 CA016059NCI NIH HHS P30 CA016086NIDDK NIH HHS R01 DK115563
6 · The paper itself

Abstract

During human development, there is a switch in the erythroid compartment at birth that results in silencing of expression of fetal hemoglobin (HbF). Reversal of this silencing has been shown to be effective in overcoming the pathophysiologic defect in sickle cell anemia. Among the many transcription factors and epigenetic effectors that are known to mediate HbF silencing, two of the most potent are BCL11A and MBD2-NuRD. In this report, we present direct evidence that MBD2-NuRD occupies the γ-globin gene promoter in adult erythroid cells and positions a nucleosome there that results in a closed chromatin conformation that prevents binding of the transcriptional activator, NF-Y. We show that the specific isoform, MBD2a, is required for the formation and stable occupancy of this repressor complex that includes BCL11A, MBD2a-NuRD, and the arginine methyltransferase, PRMT5. The methyl cytosine binding preference and the arginine-rich (GR) domain of MBD2a are required for high affinity binding to methylated γ-globin gene proximal promoter DNA sequences. Mutation of the methyl cytosine-binding domain (MBD) of MBD2 results in a variable but consistent loss of γ-globin gene silencing, in support of the importance of promoter methylation. The GR domain of MBD2a is also required for recruitment of PRMT5, which in turn results in placement of the repressive chromatin mark H3K8me2s at the promoter. These findings support a unified model that integrates the respective roles of BCL11A, MBD2a-NuRD, PRMT5, and DNA methylation in HbF silencing.

Indexed as

Fetal Hemoglobingamma-GlobinsAdultChromatinCytosineDNA-Binding ProteinsGenes, RegulatorHumansInfant, NewbornProtein-Arginine N-MethyltransferasesTranscription FactorsChromatinCytosineDNA-Binding ProteinsFetal Hemoglobingamma-GlobinsMBD2 protein, humanPRMT5 protein, humanProtein-Arginine N-MethyltransferasesTranscription FactorsBCL11ADNA methylationfetal hemoglobinMBD2a–NuRDPRMT5

Identifiers

PMID37307480
PMCPMC10288633
OpenAlexW4380354386

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.