Evidence map›Paper›PMID 37306669›Full record

ArticleJournal of the American Chemical Society2023

Characterization of Methyl- and Acetyl-Ni Intermediates in Acetyl CoA Synthase Formed during Anaerobic CO

Mehmet Can, Macon J Abernathy, Seth Wiley, Claire Griffith, Christopher D James, Jin Xiong, Yisong Guo, Brian M Hoffman, Stephen W Ragsdale, Ritimukta Sarangi

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Capturing a methanogenic carbon monoxide dehydrogenase/acetyl-CoA synthase complex via cryogenic electron microscopy.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  6. Chemical Antiquity in Metabolism.Accounts of chemical research · 2024
    Article
  7. Mixed Valence {NiJournal of the American Chemical Society · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Mehmet CanDepartment of Biochemistry, Faculty of Pharmacy, Ankara Medipol University, Ankara 06050, Turkey.ORCID 0000-0002-5960-8040
Macon J AbernathyStanford Synchrotron Radiation Lightsource, SLAC National Accelerator Laboratory, Menlo Park, California 94025, United States.ORCID 0000-0002-0455-2086
Seth WileyBiosciences Center, National Renewable Energy Laboratory, Golden, Colorado 80401, United States.ORCID 0000-0002-2447-5153
Claire GriffithDepartment of Biological Chemistry, University of Michigan, Ann Arbor, Michigan 48109, United States.
Christopher D JamesDepartment of Chemistry, Northwestern University, Evanston, Illinois 60208, United States.ORCID 0000-0002-6207-6380
Jin XiongDepartment of Chemistry, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213, United States.ORCID 0000-0001-7443-0554
Yisong GuoDepartment of Chemistry, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213, United States.ORCID 0000-0002-4132-3565
Brian M HoffmanDepartment of Chemistry, Northwestern University, Evanston, Illinois 60208, United States.ORCID 0000-0002-3100-0746
Stephen W RagsdaleDepartment of Biological Chemistry, University of Michigan, Ann Arbor, Michigan 48109, United States.ORCID 0000-0003-3938-8906
Ritimukta SarangiStanford Synchrotron Radiation Lightsource, SLAC National Accelerator Laboratory, Menlo Park, California 94025, United States.ORCID 0000-0002-2764-2279

Funding

X-ray Absorption Spectroscopy (XAS) pp.711-759P41GM103393 · NIGMS · STANFORD UNIVERSITY · PI HODGSON, KEITH O · 2012 to 2019
$30.6M
Michigan Chemistry-Biology Interface Training ProgramT32GM132046 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Emily E Scott, Wenjing Wang · 2019 to 2026
$4.1M
Elucidate Mechanisms of Quinolone Alkaloid Biosynthesis via Iron(II)/2-Oxoglutarate Dependent Enzymes: Diverse, but Controlled ReactivityR01GM125924 · NIGMS · CARNEGIE-MELLON UNIVERSITY · PI Yisong Guo · 2018 to 2026
$3.3M
Metalloprotein Mechanisms of Redox Regulation and CatalysisR35GM141758 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI RAGSDALE, STEPHEN WILEY · 2021 to 2025
$3.0M
NIGMS NIH HHS P41 GM103393NIGMS NIH HHS R01 GM125924NIGMS NIH HHS R35 GM141758NIGMS NIH HHS T32 GM132046
6 · The paper itself

Abstract

The Wood-Ljungdahl Pathway is a unique biological mechanism of carbon dioxide and carbon monoxide fixation proposed to operate through nickel-based organometallic intermediates. The most unusual steps in this metabolic cycle involve a complex of two distinct nickel-iron-sulfur proteins: CO dehydrogenase and acetyl-CoA synthase (CODH/ACS). Here, we describe the nickel-methyl and nickel-acetyl intermediates in ACS completing the characterization of all its proposed organometallic intermediates. A single nickel site (Ni

Indexed as

Iron-Sulfur ProteinsNickelAcetyl Coenzyme AAldehyde OxidoreductasesAnaerobiosisCarbon DioxideCarbon MonoxideNitric Oxide SynthaseAcetyl Coenzyme AAldehyde OxidoreductasesCarbon DioxideCarbon MonoxideIron-Sulfur ProteinsNickelNitric Oxide Synthase

Identifiers

PMID37306669
PMCPMC10311460

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.