Evidence map›Paper›PMID 37306056›Full record

ArticleThe New phytologist2023

Combining multiplex gene editing and doubled haploid technology in maize.

Lennert Impens, Christian D Lorenzo, Wout Vandeputte, Pieter Wytynck, Kevin Debray, Jari Haeghebaert, Denia Herwegh, Thomas B Jacobs, Tom Ruttink, Hilde Nelissen and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in The New phytologist, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 21 citations in OpenAlex.

  1. Review
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  10. In vitro- and in vivo-based approaches for doubled haploid production in Zea mays L.: challenges and opportunities.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
    Review
  11. Article
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  14. Roles of auxin pathways in maize biology.Journal of experimental botany · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 1 institution in 1 country.

Lennert ImpensDepartment of Plant Biotechnology and Bioinformatics, Ghent University, B-9052, Ghent, Belgium.ORCID 0000-0002-6330-4744
Christian D LorenzoDepartment of Plant Biotechnology and Bioinformatics, Ghent University, B-9052, Ghent, Belgium.ORCID 0000-0003-3954-0234
Wout VandeputteDepartment of Plant Biotechnology and Bioinformatics, Ghent University, B-9052, Ghent, Belgium.ORCID 0000-0001-7813-3645
Pieter WytynckDepartment of Plant Biotechnology and Bioinformatics, Ghent University, B-9052, Ghent, Belgium.ORCID 0000-0002-8712-4051
Kevin DebrayDepartment of Plant Biotechnology and Bioinformatics, Ghent University, B-9052, Ghent, Belgium.ORCID 0000-0003-2898-9415
Jari HaeghebaertDepartment of Plant Biotechnology and Bioinformatics, Ghent University, B-9052, Ghent, Belgium.ORCID 0000-0002-0483-4454
Denia HerweghDepartment of Plant Biotechnology and Bioinformatics, Ghent University, B-9052, Ghent, Belgium.ORCID 0000-0001-7744-6375
Thomas B JacobsDepartment of Plant Biotechnology and Bioinformatics, Ghent University, B-9052, Ghent, Belgium.ORCID 0000-0002-5408-492X
Tom RuttinkDepartment of Plant Biotechnology and Bioinformatics, Ghent University, B-9052, Ghent, Belgium.ORCID 0000-0002-1012-9399
Hilde NelissenDepartment of Plant Biotechnology and Bioinformatics, Ghent University, B-9052, Ghent, Belgium.ORCID 0000-0001-7494-1290
Dirk InzéDepartment of Plant Biotechnology and Bioinformatics, Ghent University, B-9052, Ghent, Belgium.ORCID 0000-0002-3217-8407
Laurens PauwelsDepartment of Plant Biotechnology and Bioinformatics, Ghent University, B-9052, Ghent, Belgium.ORCID 0000-0002-0221-9052
Ghent University · BE

Funding

European Research Council 833866
6 · The paper itself

Abstract

A major advantage of using CRISPR/Cas9 for gene editing is multiplexing, that is, the simultaneous targeting of many genes. However, primary transformants typically contain hetero-allelic mutations or are genetic mosaic, while genetically stable lines that are homozygous are desired for functional analysis. Currently, a dedicated and labor-intensive effort is required to obtain such higher-order mutants through several generations of genetic crosses and genotyping. We describe the design and validation of a rapid and efficient strategy to produce lines of genetically identical plants carrying various combinations of homozygous edits, suitable for replicated analysis of phenotypical differences. This approach was achieved by combining highly multiplex gene editing in Zea mays (maize) with in vivo haploid induction and efficient in vitro generation of doubled haploid plants using embryo rescue doubling. By combining three CRISPR/Cas9 constructs that target in total 36 genes potentially involved in leaf growth, we generated an array of homozygous lines with various combinations of edits within three generations. Several genotypes show a reproducible 10% increase in leaf size, including a septuple mutant combination. We anticipate that our strategy will facilitate the study of gene families via multiplex CRISPR mutagenesis and the identification of allele combinations to improve quantitative crop traits.

Indexed as

Gene EditingZea maysCRISPR-Cas SystemsGenome, PlantHaploidyPlants, Genetically ModifiedCRISPR/Cas9doubled haploidsgene editinggene familyhaploid inductionmaizemultiplex gene editingmutation stacking

Identifiers

PMID37306056
PMCPMC7614789
OpenAlexW4380291932

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.