Evidence map›Paper›PMID 37298142›Full record

ArticleInternational journal of molecular sciences2023

Identification of Proteins Involved in Cell Membrane Permeabilization by Nanosecond Electric Pulses (nsEP).

Giedre Silkuniene, Uma M Mangalanathan, Alessandra Rossi, Peter A Mollica, Andrei G Pakhomov, Olga Pakhomova

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Real-time imaging of individual electropores proves their longevity in cells.Biochemical and biophysical research communications · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 3 countries.

Giedre SilkunieneFrank Reidy Research Center for Bioelectrics, Old Dominion University, Norfolk, VA 23508, USA.ORCID 0000-0001-8436-9718
Uma M MangalanathanFrank Reidy Research Center for Bioelectrics, Old Dominion University, Norfolk, VA 23508, USA.ORCID 0000-0003-0126-5660
Alessandra RossiFrank Reidy Research Center for Bioelectrics, Old Dominion University, Norfolk, VA 23508, USA.ORCID 0000-0001-9042-3549
Peter A MollicaCollege of Health Sciences, Old Dominion University, Norfolk, VA 23508, USA.ORCID 0000-0002-0621-2819
Andrei G PakhomovFrank Reidy Research Center for Bioelectrics, Old Dominion University, Norfolk, VA 23508, USA.ORCID 0000-0003-3816-3860
Olga PakhomovaFrank Reidy Research Center for Bioelectrics, Old Dominion University, Norfolk, VA 23508, USA.ORCID 0000-0003-4950-4130
Old Dominion University · USLithuanian University of Health Sciences · LT

Funding

United States Air Force Office of Scientific Research A9550-15-1- 0517
6 · The paper itself

Abstract

The study was aimed at identifying endogenous proteins which assist or impede the permeabilized state in the cell membrane disrupted by nsEP (20 or 40 pulses, 300 ns width, 7 kV/cm). We employed a LentiArray CRISPR library to generate knockouts (KOs) of 316 genes encoding for membrane proteins in U937 human monocytes stably expressing Cas9 nuclease. The extent of membrane permeabilization by nsEP was measured by the uptake of Yo-Pro-1 (YP) dye and compared to sham-exposed KOs and control cells transduced with a non-targeting (scrambled) gRNA. Only two KOs, for SCNN1A and CLCA1 genes, showed a statistically significant reduction in YP uptake. The respective proteins could be part of electropermeabilization lesions or increase their lifespan. In contrast, as many as 39 genes were identified as likely hits for the increased YP uptake, meaning that the respective proteins contributed to membrane stability or repair after nsEP. The expression level of eight genes in different types of human cells showed strong correlation (R > 0.9,

Indexed as

ElectricityElectroporationAnimalsBiological TransportCell MembraneCell Membrane PermeabilityCricetinaeCricetulusHumanselectropermeabilizationelectroporationmembrane lesionsmembrane proteinsmembrane repairnsPEF

Identifiers

PMID37298142
PMCPMC10253066
OpenAlexW4378228420

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.