Evidence map›Paper›PMID 37296138›Full record

ArticleScientific reports2023

The evolutionary history of Brachyury genes in Hydrozoa involves duplications, divergence, and neofunctionalization.

Alexandra A Vetrova, Daria M Kupaeva, Alena Kizenko, Tatiana S Lebedeva, Peter Walentek, Nikoloz Tsikolia, Stanislav V Kremnyov

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Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
8.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 6 institutions in 3 countries.

Alexandra A VetrovaLaboratory of Morphogenesis Evolution, Koltzov Institute of Developmental Biology RAS, Vavilova 26, Moscow, 119334, Russia.
Daria M KupaevaDepartment of Embryology, Faculty of Biology, Lomonosov Moscow State University, Leninskiye Gory 1/12, Moscow, 119234, Russia.
Alena KizenkoInstitute of Science and Technology Austria (ISTA), Am Campus 1, 3400, Klosterneuburg, Austria.
Tatiana S LebedevaDepartment for Molecular Evolution and Development, Centre of Organismal Systems Biology, University of Vienna, Althanstraße 14, 1090, Vienna, Austria.
Peter WalentekRenal Division, Internal Medicine IV, Medical Center, Faculty of Medicine, University of Freiburg, 79106, Freiburg, Germany.
Nikoloz TsikoliaInstitute of Anatomy and Embryology, University Medical Center Göttingen, Kreuzbergring 36, 37085, Göttingen, Germany.
Stanislav V KremnyovLaboratory of Morphogenesis Evolution, Koltzov Institute of Developmental Biology RAS, Vavilova 26, Moscow, 119334, Russia. s.kremnyov@gmail.com.
Lomonosov Moscow State University · RUInstitute of Science and Technology Austria · ATKoltzov Institute of Developmental Biology · RUUniversitätsmedizin Göttingen · DEUniversity of Freiburg · DEUniversity of Vienna · AT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Brachyury, a member of T-box gene family, is widely known for its major role in mesoderm specification in bilaterians. It is also present in non-bilaterian metazoans, such as cnidarians, where it acts as a component of an axial patterning system. In this study, we present a phylogenetic analysis of Brachyury genes within phylum Cnidaria, investigate differential expression and address a functional framework of Brachyury paralogs in hydrozoan Dynamena pumila. Our analysis indicates two duplication events of Brachyury within the cnidarian lineage. The first duplication likely appeared in the medusozoan ancestor, resulting in two copies in medusozoans, while the second duplication arose in the hydrozoan ancestor, resulting in three copies in hydrozoans. Brachyury1 and 2 display a conservative expression pattern marking the oral pole of the body axis in D. pumila. On the contrary, Brachyury3 expression was detected in scattered presumably nerve cells of the D. pumila larva. Pharmacological modulations indicated that Brachyury3 is not under regulation of cWnt signaling in contrast to the other two Brachyury genes. Divergence in expression patterns and regulation suggest neofunctionalization of Brachyury3 in hydrozoans.

Indexed as

CnidariaHydrozoaAnimalsBiological EvolutionBrachyury ProteinFetal ProteinsPhylogenyBrachyury ProteinFetal Proteins

Identifiers

PMID37296138
PMCPMC10256749
OpenAlexW4380086946

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.