Evidence map›Paper›PMID 37296103›Full record

ArticleNature communications2023

Systematic detection of tertiary structural modules in large RNAs and RNP interfaces by Tb-seq.

Shivali Patel, Alec N Sexton, Madison S Strine, Craig B Wilen, Matthew D Simon, Anna Marie Pyle

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Structural basis for the function of long noncoding RNAbioRxiv : the preprint server for biology · 2025
    Article
  7. Article
  8. Article
  9. Long Non-Coding RNAs as "MYC Facilitators".Pathophysiology : the official journal of the International Society for Pathophysiology · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Shivali PatelDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA.
Alec N SextonDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA.
Madison S StrineDepartment of Laboratory Medicine, Yale School of Medicine, New Haven, CT, USA.ORCID 0000-0001-8572-1314
Craig B WilenDepartment of Laboratory Medicine, Yale School of Medicine, New Haven, CT, USA.ORCID 0000-0003-2495-9403
Matthew D SimonDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA.ORCID 0000-0001-7423-5265
Anna Marie PyleHoward Hughes Medical Institute, Chevy Chase, MD, USA. anna.pyle@yale.edu.ORCID 0000-0001-9045-8872
Yale University · USHoward Hughes Medical Institute · US

Funding

Skill Development for Diverse Scientific Careers: A New Course Predoctoral Program in Cellular and Molecular BiologyT32GM007223 · NIGMS · YALE UNIVERSITY · PI BASERGA, SUSAN J · 1985 to 2019
$31.0M
Howard Hughes Medical InstituteNIGMS NIH HHS T32 GM007223
6 · The paper itself

Abstract

Compact RNA structural motifs control many aspects of gene expression, but we lack methods for finding these structures in the vast expanse of multi-kilobase RNAs. To adopt specific 3-D shapes, many RNA modules must compress their RNA backbones together, bringing negatively charged phosphates into close proximity. This is often accomplished by recruiting multivalent cations (usually Mg

Indexed as

RNATerbiumCationsNucleic Acid ConformationNucleotide MotifsCationsRNATerbium

Identifiers

PMID37296103
PMCPMC10255950
OpenAlexW4380087696

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.