Evidence map›Paper›PMID 37294497›Full record

ArticleFolia microbiologica2023

COVID-19-associated pulmonary aspergillosis (CAPA): identification of Aspergillus species and determination of antifungal susceptibility profiles.

Ali Ozturk, Taylan Bozok, Merve Erdogan, Bashar Ms Ibrahim, Tugce Simsek Bozok

Open access · bronzeAbstract read
In one paragraph

Article in Folia microbiologica, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.6field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 1 country.

Ali OzturkDepartment of Medical Microbiology, Faculty of Medicine, Nigde Omer Halisdemir University, Nigde, Turkey. ali.81ozturk@gmail.com.ORCID http://orcid.org/0000-0003-2428-1831
Taylan BozokDepartment of Medical Microbiology, Faculty of Medicine, Mersin University, Mersin, Turkey.
Merve ErdoganDepartment of Medical Microbiology, Faculty of Medicine, Sanko University, Gaziantep, Turkey.
Bashar Ms IbrahimDepartment of Pharmaceutical Microbiology, Suleyman Demirel University, Isparta, Turkey.ORCID http://orcid.org/0000-0003-3086-0995
Tugce Simsek BozokDepartment of Infectious Diseases and Clinical Microbiology, Mersin University Hospital, Mersin, Turkey.
Mersin Üniversitesi · TRNiğde Ömer Halisdemir Üniversitesi · TRSanko University · TRSüleyman Demirel University · TR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Among the co-infectious agents in COVID-19 patients, Aspergillus species cause invasive pulmonary aspergillosis (IPA). IPA is difficult to diagnose and is associated with high morbidity and mortality. This study is aimed at identifying Aspergillus spp. from sputum and tracheal aspirate (TA) samples of COVID-19 patients and at determining their antifungal susceptibility profiles. A total of 50 patients with COVID-19 hospitalized in their intensive care units (ICU) were included in the study. Identification of Aspergillus isolates was performed by phenotypic and molecular methods. ECMM/ISHAM consensus criteria were used for IPA case definitions. The antifungal susceptibility profiles of isolates were determined by the microdilution method. Aspergillus spp. was detected in 35 (70%) of the clinical samples. Among the Aspergillus spp., 20 (57.1%) A. fumigatus, six (17.1%) A. flavus, four (11.4%) A. niger, three (8.6%) A. terreus, and two (5.7%) A. welwitschiae were identified. In general, Aspergillus isolates were susceptible to the tested antifungal agents. In the study, nine patients were diagnosed with possible IPA, 11 patients were diagnosed with probable IPA, and 15 patients were diagnosed with Aspergillus colonization according to the used algorithms. Serum galactomannan antigen positivity was found in 11 of the patients diagnosed with IPA. Our results provide data on the incidence of IPA, identification of Aspergillus spp., and its susceptibility profiles in critically ill COVID-19 patients. Prospective studies are needed for a faster diagnosis or antifungal prophylaxis to manage the poor prognosis of IPA and reduce the risk of mortality.

Indexed as

COVID-19Invasive Pulmonary AspergillosisPulmonary AspergillosisAntifungal AgentsAspergillusHumansAntifungal AgentsAntifungal susceptibilityAspergillus spp.COVID-19Invasive pulmonary aspergillosisSARS-CoV-2

Identifiers

PMID37294497
PMCPMC10250855
OpenAlexW4379966313

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.