Evidence map›Paper›PMID 37294469›Full record

ArticleMolecular biology reports2023

Phenotypic and molecular genetics study of Geotrichum candidumLink (1809) and Geotrichum silvicola Pimenta (2005) cultivated on mitis salivarius agar.

Ahmed Badri Abed, Kaan Hürkan, Arzu Ünal, Büşra Aydın, Safiye Elif Korcan

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Article in Molecular biology reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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5 · Who and what money

Authors and funding

5 authors.

Ahmed Badri AbedDepartment of Molecular Biology and Genetics, Faculty of Arts and Sciences, Uşak University, Uşak, 64200, Turkey. ahmbiq8@gmail.com.ORCID http://orcid.org/0000-0002-7803-7917
Kaan HürkanFaculty of Agriculture, Department of Agricultural Biotechnology, Iğdır University, Iğdır, Turkey.ORCID http://orcid.org/0000-0001-5330-7442
Arzu ÜnalFaculty of Agriculture, Department of Agricultural Biotechnology, Iğdır University, Iğdır, Turkey.ORCID http://orcid.org/0000-0003-4427-3169
Büşra AydınDepartment of Molecular Biology and Genetics, Faculty of Arts and Sciences, Uşak University, Uşak, 64200, Turkey.ORCID https://orcid.org/0000-0002-1199-5600
Safiye Elif KorcanUşak Health Training School, Uşak University, Uşak, 64200, Turkey.ORCID http://orcid.org/0000-0001-7875-5516

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundGeotrichum is a genus of fungi found in different habitats throughout the world. Although Geotrichum and its related species have been extensively reclassified and taxonomically revised, it is still the target for many researches. METHODS AND

resultsIn this study, phenotypic and molecular genetics comparisons were performed between Geotrichum candidum and Geotrichum silvicola. Mitis Salivarius Agar was used as the growing medium for the phenotypic comparison study, which was carried out at two temperatures (20-25 and 37 °C). For genotypic comparison, we compared the 18 S, ITS, and 28 S sequences of universal DNA barcode regions of both species. Important findings on the new culture media for fungal isolation were revealed by the results. The phenotypic variation between the two species' colonies, including their shapes, sizes, textures and growth rates, were strikingly different. DNA sequences of both species showed that pairwise identities of the species were 99.9% for 18 S, 100% for ITS and 99.6% for 28 S regions.

conclusionsContrary to what is commonly seen, the results showed that 18 S, ITS and 28 S failed to discriminate the species. The first investigation into the performance of Mitis Salivarius Agar as a fungus culture medium is reported in this work, and proved its efficiency. Additionally, this is the first study to compare G. candidum with G. silvicola by means of both phenotypic and genotypic analysis.

Indexed as

GeotrichumPimentaAgarMolecular BiologyAgarDNA barcodingGenotypic and phenotypic comparisonGeotrichumMSA

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