Evidence map›Paper›PMID 37294305›Full record

ArticleThe Journal of antimicrobial chemotherapy2023

Evaluation of the microbiota-sparing properties of the anti-staphylococcal antibiotic afabicin.

J Nowakowska, D R Cameron, A De Martino, J Kühn, S Le Fresne-Languille, S Leuillet, Y Amouzou, F Wittke, T Carton, F Le Vacon and 3 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of antimicrobial chemotherapy, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Antimicrobial agents and chemotherapy · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 1 institution in 1 country.

J NowakowskaTranslational Medicine Department, Debiopharm International SA, Chemin Messidor 5-7, 1006 Lausanne, Switzerland.
D R CameronTranslational Medicine Department, Debiopharm International SA, Chemin Messidor 5-7, 1006 Lausanne, Switzerland.
A De MartinoResearch and Development Department, Biofortis SAS, 3 route de la Chatterie, 44800 Saint-Herblain, France.
J KühnTranslational Medicine Department, Debiopharm International SA, Chemin Messidor 5-7, 1006 Lausanne, Switzerland.
S Le Fresne-LanguilleResearch and Development Department, Biofortis SAS, 3 route de la Chatterie, 44800 Saint-Herblain, France.
S LeuilletResearch and Development Department, Biofortis SAS, 3 route de la Chatterie, 44800 Saint-Herblain, France.
Y AmouzouResearch and Development Department, Biofortis SAS, 3 route de la Chatterie, 44800 Saint-Herblain, France.
F WittkeClinical Development Department, Debiopharm International SA, Chemin Messidor 5-7, 1006 Lausanne, Switzerland.
T CartonResearch and Development Department, Biofortis SAS, 3 route de la Chatterie, 44800 Saint-Herblain, France.
F Le VaconResearch and Development Department, Biofortis SAS, 3 route de la Chatterie, 44800 Saint-Herblain, France.
R L ChavesClinical Development Department, Debiopharm International SA, Chemin Messidor 5-7, 1006 Lausanne, Switzerland.
V Nicolas-MetralTranslational Medicine Department, Debiopharm International SA, Chemin Messidor 5-7, 1006 Lausanne, Switzerland.
G VuagniauxTranslational Medicine Department, Debiopharm International SA, Chemin Messidor 5-7, 1006 Lausanne, Switzerland.
Debiopharm (Switzerland) · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundAntibiotic use is associated with collateral damage to the healthy microbiota. Afabicin is a first-in-class prodrug inhibitor of the FabI enzyme that, when converted to the pharmacologically active agent afabicin desphosphono, demonstrates a staphylococcal-specific spectrum of activity. An expected benefit of highly targeted antibiotics such as afabicin is microbiome preservation.

objectivesTo compare the effects of oral treatment with afabicin and standard-of-care antibiotics upon the murine gut microbiota, and to assess the effects of oral afabicin treatment on the human gut microbiota.

methodsGut microbiota effects of a 10 day oral course of afabicin treatment were monitored in mice and compared with clindamycin, linezolid and moxifloxacin at human-equivalent dose levels using 16S rDNA sequencing. Further, the gut microbiota of healthy volunteers was longitudinally assessed across 20 days of oral treatment with afabicin 240 mg twice daily.

resultsAfabicin treatment did not significantly alter gut microbiota diversity (Shannon H index) or richness (rarefied Chao1) in mice. Only limited changes to taxonomic abundances were observed in afabicin-treated animals. In contrast, clindamycin, linezolid and moxifloxacin each caused extensive dysbiosis in the murine model. In humans, afabicin treatment was not associated with alterations in Shannon H or rarefied Chao1 indices, nor relative taxonomic abundances, supporting the findings from the animal model.

conclusionsOral treatment with afabicin is associated with preservation of the gut microbiota in mice and healthy subjects.

Indexed as

Anti-Bacterial AgentsMicrobiotaAnimalsBenzofuransClindamycinHumansLinezolidMiceMoxifloxacinNaphthyridinesStaphylococcusafabicinAnti-Bacterial AgentsBenzofuransClindamycinLinezolidMoxifloxacinNaphthyridines

Identifiers

PMID37294305
PMCPMC10393889
OpenAlexW4379967307

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.