Evidence map›Paper›PMID 37293555›Full record

ArticleFrontiers in molecular biosciences2023

Untargeted metabolomics approach and molecular networking analysis reveal changes in chemical composition under the influence of altitudinal variation in bamboo species.

Luis Carlos Chitiva, Hair Santiago Lozano-Puentes, Ximena Londoño, Tiago F Leão, Mónica P Cala, Eduardo Ruiz-Sanchez, Lucía Ana Díaz-Ariza, Juliet A Prieto-Rodríguez, Ian Castro-Gamboa, Geison M Costa

Open access · goldAbstract read
In one paragraph

Article in Frontiers in molecular biosciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
6.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 3 countries.

Luis Carlos ChitivaDepartment of Chemistry, Faculty of Sciences, Pontificia Universidad Javeriana, Bogotá, Colombia.
Hair Santiago Lozano-PuentesDepartment of Chemistry, Faculty of Sciences, Pontificia Universidad Javeriana, Bogotá, Colombia.
Ximena LondoñoFaculty of Agricultural Sciences, Universidad Nacional de Colombia, Palmira, Colombia.
Tiago F LeãoInstitute of Chemistry, São Paulo State University (UNESP), Araraquara, Brazil.
Mónica P CalaMetabolomics Core Facility-MetCore, Universidad de los Andes, Bogotá, Colombia.
Eduardo Ruiz-SanchezDepartment of Botany and Zoology, Universidad de Guadalajara, Jalisco, México.
Lucía Ana Díaz-ArizaDepartment of Biology, Faculty of Sciences, Pontificia Universidad Javeriana, Bogotá, Colombia.
Juliet A Prieto-RodríguezDepartment of Chemistry, Faculty of Sciences, Pontificia Universidad Javeriana, Bogotá, Colombia.
Ian Castro-GamboaInstitute of Chemistry, São Paulo State University (UNESP), Araraquara, Brazil.
Geison M CostaDepartment of Chemistry, Faculty of Sciences, Pontificia Universidad Javeriana, Bogotá, Colombia.
Pontificia Universidad Javeriana · COUniversidade Estadual Paulista (Unesp) · BRUniversidad de Guadalajara · MXUniversidad de Los Andes · COUniversidad Nacional de Colombia · CO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bamboo species have traditionally been used as building material and potential source of bioactive substances, as they produce a wide variety of phenolic compounds, including flavonoids and cinnamic acid derivatives that are considered biologically active. However, the effects of growth conditions such as location, altitude, climate, and soil on the metabolome of these species still need to be fully understood. This study aimed to evaluate variations in chemical composition induced by altitudinal gradient (0-3000 m) by utilizing an untargeted metabolomics approach and mapping chemical space using molecular networking analysis. We analyzed 111 samples from 12 bamboo species collected from different altitudinal ranges using liquid chromatography coupled with quadrupole time-of-flight mass spectrometry (LC-QTOF-MS). We used multivariate and univariate statistical analyses to identify the metabolites that showed significant differences in the altitude environments. Additionally, we used the Global Natural Products Social Molecular Networking (GNPS) web platform to perform chemical mapping by comparing the metabolome among the studied species and the reference spectra from its database. The results showed 89 differential metabolites between the altitudinal ranges investigated, wherein high altitude environments significantly increased the profile of flavonoids. While, low altitude environments significantly boosted the profile of cinnamic acid derivatives, particularly caffeoylquinic acids (CQAs). MolNetEnhancer networks confirmed the same differential molecular families already found, revealing metabolic diversity. Overall, this study provides the first report of variations induced by altitude in the chemical profile of bamboo species. The findings may possess fascinating active biological properties, thus offering an alternative use for bamboo.

Indexed as

altitudinal variationbamboocinnamic acid derivativesflavonoidsGNPSGuaduanatural productsuntargeted metabolomics

Identifiers

PMID37293555
PMCPMC10246775
OpenAlexW4378070028

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.