Evidence map›Paper›PMID 37291191›Full record

ArticleScientific reports2023

Broad anti-pathogen potential of DEAD box RNA helicase eIF4A-targeting rocaglates.

Wiebke Obermann, Mohammad Farhan Darin Azri, Leonie Konopka, Nina Schmidt, Francesca Magari, Julian Sherman, Liliana M R Silva, Carlos Hermosilla, Andreas H Ludewig, Hicham Houhou and 13 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 5 institutions in 4 countries.

Wiebke Obermann *Institute of Pharmaceutical Chemistry, Philipps University Marburg, Marburg, Germany.
Mohammad Farhan Darin Azri *Sarawak Biodiversity Centre, Kuching, Sarawak, Malaysia.
Leonie KonopkaInstitute of Pharmaceutical Chemistry, Philipps University Marburg, Marburg, Germany.
Nina SchmidtInstitute of Pharmaceutical Chemistry, Philipps University Marburg, Marburg, Germany.
Francesca MagariInstitute of Pharmaceutical Chemistry, Philipps University Marburg, Marburg, Germany.
Julian ShermanDepartment of Microbiology, New York University Grossman School of Medicine, New York, NY, USA.
Liliana M R SilvaInstitute of Parasitology, Faculty of Veterinary Medicine, Justus Liebig University Giessen, Giessen, Germany.
Carlos HermosillaInstitute of Parasitology, Faculty of Veterinary Medicine, Justus Liebig University Giessen, Giessen, Germany.
Andreas H LudewigBoyce Thompson Institute, Department of Chemistry and Chemical Biology, Cornell University, Ithaca, NY, USA.
Hicham HouhouInstitute of Parasitology, Faculty of Veterinary Medicine, Justus Liebig University Giessen, Giessen, Germany.
Simone HaeberleinInstitute of Parasitology, Faculty of Veterinary Medicine, Justus Liebig University Giessen, Giessen, Germany.
Mona Yiting LuoInstitute for Insect Biotechnology, Justus Liebig University Giessen, Giessen, Germany.
Irina HäckerInstitute for Insect Biotechnology, Justus Liebig University Giessen, Giessen, Germany.
Marc F ScheteligInstitute for Insect Biotechnology, Justus Liebig University Giessen, Giessen, Germany.
Christoph G GreveldingInstitute of Parasitology, Faculty of Veterinary Medicine, Justus Liebig University Giessen, Giessen, Germany.
Frank C SchroederBoyce Thompson Institute, Department of Chemistry and Chemical Biology, Cornell University, Ithaca, NY, USA.
Gilbert Sei Kung LauSarawak Biodiversity Centre, Kuching, Sarawak, Malaysia.
Anja TaubertInstitute of Parasitology, Faculty of Veterinary Medicine, Justus Liebig University Giessen, Giessen, Germany.
Ana RodriguezDepartment of Microbiology, New York University Grossman School of Medicine, New York, NY, USA.
Andreas HeineInstitute of Pharmaceutical Chemistry, Philipps University Marburg, Marburg, Germany.
Tiong Chia YeoSarawak Biodiversity Centre, Kuching, Sarawak, Malaysia. cyeo@sbc.org.my.
Arnold GrünwellerInstitute of Pharmaceutical Chemistry, Philipps University Marburg, Marburg, Germany. arnold.gruenweller@staff.uni-marburg.de.
Gaspar Taroncher-OldenburgSarawak Biodiversity Centre, Kuching, Sarawak, Malaysia. gtaroncher@gmail.com.
Justus-Liebig-Universität Gießen · DEPhilipps University of Marburg · DESarawak Biodiversity Centre · MYCornell University · USNew York University · US

Funding

A minimally invasive synthetic bio-driven approach for natural products discoveryU01GM110714 · NIGMS · ROCKEFELLER UNIVERSITY · PI BRADY, SEAN F · 2015 to 2019
$11.1M
Small molecule signaling in C. elegansR35GM131877 · NIGMS · BOYCE THOMPSON INST FOR PLANT RESEARCH · PI Frank Clemens Schroeder · 2019 to 2026
$5.0M
Howard Hughes Medical InstituteNIGMS NIH HHS R35 GM131877NIGMS NIH HHS U01 GM110714
6 · The paper itself

Abstract

Inhibition of eukaryotic initiation factor 4A has been proposed as a strategy to fight pathogens. Rocaglates exhibit the highest specificities among eIF4A inhibitors, but their anti-pathogenic potential has not been comprehensively assessed across eukaryotes. In silico analysis of the substitution patterns of six eIF4A1 aa residues critical to rocaglate binding, uncovered 35 variants. Molecular docking of eIF4A:RNA:rocaglate complexes, and in vitro thermal shift assays with select recombinantly expressed eIF4A variants, revealed that sensitivity correlated with low inferred binding energies and high melting temperature shifts. In vitro testing with silvestrol validated predicted resistance in Caenorhabditis elegans and Leishmania amazonensis and predicted sensitivity in Aedes sp., Schistosoma mansoni, Trypanosoma brucei, Plasmodium falciparum, and Toxoplasma gondii. Our analysis further revealed the possibility of targeting important insect, plant, animal, and human pathogens with rocaglates. Finally, our findings might help design novel synthetic rocaglate derivatives or alternative eIF4A inhibitors to fight pathogens.

Indexed as

Eukaryotic Initiation Factor-4ARNAAnimalsDEAD-box RNA HelicasesHumansMolecular Docking SimulationDEAD-box RNA HelicasesEukaryotic Initiation Factor-4ARNA

Identifiers

PMID37291191
PMCPMC10250355
OpenAlexW4379881531

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.