Evidence map›Paper›PMID 37289846›Full record

ArticlePLoS biology2023

Essential and recurrent roles for hairpin RNAs in silencing de novo sex chromosome conflict in Drosophila simulans.

Jeffrey Vedanayagam, Marion Herbette, Holly Mudgett, Ching-Jung Lin, Chun-Ming Lai, Caitlin McDonough-Goldstein, Stephen Dorus, Benjamin Loppin, Colin Meiklejohn, Raphaëlle Dubruille and 1 more

Open access · goldAbstract read
In one paragraph

Article in PLoS biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
6.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
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  4. Article
  5. Review
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  8. De Novo Genes.Annual review of genetics · 2024
    Review
  9. Article
  10. bioRxiv : the preprint server for biology · 2024
    Article
  11. Review
  12. New perspectives on the causes and consequences of male meiotic drive.Current opinion in genetics & development · 2023
    Review
  13. Review
  14. Proliferation and dissemination of killer meiotic drive loci.Current opinion in genetics & development · 2023
    Review
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 2 countries.

Jeffrey VedanayagamDevelopmental Biology Program, Sloan-Kettering Institute, New York, New York, United States of America.
Marion HerbetteLaboratoire de Biologie et Modélisation de la Cellule, École Normale Supérieure de Lyon CNRS UMR5239, Université Claude Bernard Lyon 1, Lyon, France.
Holly MudgettSchool of Biological Sciences, University of Nebraska, Lincoln, Nebraska, United States of America.
Ching-Jung LinDevelopmental Biology Program, Sloan-Kettering Institute, New York, New York, United States of America.
Chun-Ming LaiDevelopmental Biology Program, Sloan-Kettering Institute, New York, New York, United States of America.
Caitlin McDonough-GoldsteinCenter for Reproductive Evolution, Syracuse University, Syracuse, New York, United States of America.
Stephen DorusCenter for Reproductive Evolution, Syracuse University, Syracuse, New York, United States of America.
Benjamin LoppinLaboratoire de Biologie et Modélisation de la Cellule, École Normale Supérieure de Lyon CNRS UMR5239, Université Claude Bernard Lyon 1, Lyon, France.
Colin MeiklejohnSchool of Biological Sciences, University of Nebraska, Lincoln, Nebraska, United States of America.
Raphaëlle DubruilleLaboratoire de Biologie et Modélisation de la Cellule, École Normale Supérieure de Lyon CNRS UMR5239, Université Claude Bernard Lyon 1, Lyon, France.
Eric C LaiDevelopmental Biology Program, Sloan-Kettering Institute, New York, New York, United States of America.ORCID 0000-0002-8432-5851
Université Claude Bernard Lyon 1 · FRCornell University · USKettering University · USSyracuse University · USUniversity of Nebraska–Lincoln · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Hongbiao Carl Lekaye · 1985 to 2026
$347.4M
Selective regulatory and biogenesis mechanisms for microRNAsR01GM083300 · NIGMS · SLOAN-KETTERING INST CAN RESEARCH · PI Eric C Lai · 2007 to 2026
$9.8M
Essential roles for RNAi/hpRNAs to resolve intragenomic conflicts in the male germlineR01HD108914 · NICHD · SLOAN-KETTERING INST CAN RESEARCH · PI Eric C Lai · 2022 to 2026
$2.9M
Investigating the special role of sex chromosomes in speciation: discovering the molecular identities, functions, and evolutionary histories of X-linked hybrid male sterility genes in DrosophilaR01GM123194 · NIGMS · UNIVERSITY OF NEBRASKA LINCOLN · PI MEIKLEJOHN, COLIN D · 2017 to 2020
$1.3M
Selfish meiotic drive and the role of RNAi in defending intragenomic conflictR00GM137077 · NIGMS · UNIVERSITY OF TEXAS SAN ANTONIO · PI Jeffrey Vedanayagam · 2024 to 2026
$735k
Selfish meiotic drive and the role of RNAi in defending intragenomic conflictK99GM137077 · NIGMS · SLOAN-KETTERING INST CAN RESEARCH · PI VEDANAYAGAM, JEFFREY · 2021 to 2022
$200k
NCI NIH HHS P30 CA008748NICHD NIH HHS R01 HD108914NIGMS NIH HHS K99 GM137077NIGMS NIH HHS R00 GM137077NIGMS NIH HHS R01 GM083300NIGMS NIH HHS R01 GM123194
6 · The paper itself

Abstract

Meiotic drive loci distort the normally equal segregation of alleles, which benefits their own transmission even in the face of severe fitness costs to their host organism. However, relatively little is known about the molecular identity of meiotic drivers, their strategies of action, and mechanisms that can suppress their activity. Here, we present data from the fruitfly Drosophila simulans that address these questions. We show that a family of de novo, protamine-derived X-linked selfish genes (the Dox gene family) is silenced by a pair of newly emerged hairpin RNA (hpRNA) small interfering RNA (siRNA)-class loci, Nmy and Tmy. In the w[XD1] genetic background, knockout of nmy derepresses Dox and MDox in testes and depletes male progeny, whereas knockout of tmy causes misexpression of PDox genes and renders males sterile. Importantly, genetic interactions between nmy and tmy mutant alleles reveal that Tmy also specifically maintains male progeny for normal sex ratio. We show the Dox loci are functionally polymorphic within D. simulans, such that both nmy-associated sex ratio bias and tmy-associated sterility can be rescued by wild-type X chromosomes bearing natural deletions in different Dox family genes. Finally, using tagged transgenes of Dox and PDox2, we provide the first experimental evidence Dox family genes encode proteins that are strongly derepressed in cognate hpRNA mutants. Altogether, these studies support a model in which protamine-derived drivers and hpRNA suppressors drive repeated cycles of sex chromosome conflict and resolution that shape genome evolution and the genetic control of male gametogenesis.

Indexed as

Drosophila simulansSex ChromosomesAnimalsDrosophilaFemaleMaleMeiosisRNA, Small InterferingSex RatioX ChromosomeRNA, Small Interfering

Identifiers

PMID37289846
PMCPMC10292708
OpenAlexW4379793712

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.