Evidence map›Paper›PMID 37288534›Full record

ArticleAdvanced science (Weinheim, Baden-Wurttemberg, Germany)2023

Longitudinal Single-Cell Imaging of Engineered Strains with Stimulated Raman Scattering to Characterize Heterogeneity in Fatty Acid Production.

Nathan Tague, Haonan Lin, Jean-Baptiste Lugagne, Owen M O'Connor, Deeya Burman, Wilson W Wong, Ji-Xin Cheng, Mary J Dunlop

Open access · goldAbstract read
In one paragraph

Article in Advanced science (Weinheim, Baden-Wurttemberg, Germany), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
8.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 23 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Nathan TagueDepartment of Biomedical Engineering, Boston University, Boston, MA, 02215, USA.
Haonan LinDepartment of Biomedical Engineering, Boston University, Boston, MA, 02215, USA.
Jean-Baptiste LugagneDepartment of Biomedical Engineering, Boston University, Boston, MA, 02215, USA.
Owen M O'ConnorDepartment of Biomedical Engineering, Boston University, Boston, MA, 02215, USA.
Deeya BurmanDepartment of Biomedical Engineering, Boston University, Boston, MA, 02215, USA.
Wilson W WongDepartment of Biomedical Engineering, Boston University, Boston, MA, 02215, USA.
Ji-Xin ChengDepartment of Biomedical Engineering, Boston University, Boston, MA, 02215, USA.
Mary J DunlopDepartment of Biomedical Engineering, Boston University, Boston, MA, 02215, USA.ORCID 0000-0002-9261-8216
Boston University · US

Funding

Vibrational Spectroscopic Imaging to Unveil Hidden Signatures in Living SystemsR35GM136223 · NIGMS · BOSTON UNIVERSITY (CHARLES RIVER CAMPUS) · PI CHENG, JI-XIN · 2020 to 2025
$5.7M
NIH HHS R35GM136223
6 · The paper itself

Abstract

Understanding metabolic heterogeneity is critical for optimizing microbial production of valuable chemicals, but requires tools that can quantify metabolites at the single-cell level over time. Here, longitudinal hyperspectral stimulated Raman scattering (SRS) chemical imaging is developed to directly visualize free fatty acids in engineered Escherichia coli over many cell cycles. Compositional analysis is also developed to estimate the chain length and unsaturation of the fatty acids in living cells. This method reveals substantial heterogeneity in fatty acid production among and within colonies that emerges over the course of many generations. Interestingly, the strains display distinct types of production heterogeneity in an enzyme-dependent manner. By pairing time-lapse and SRS imaging, the relationship between growth and production at the single-cell level are examined. The results demonstrate that cell-to-cell production heterogeneity is pervasive and provides a means to link single-cell and population-level production.

Indexed as

Fatty AcidsSpectrum Analysis, RamanDiagnostic ImagingFatty Acidslongitudinal imagingmetabolic engineeringproduction heterogeneitysingle cellstimulated Raman scattering

Identifiers

PMID37288534
PMCPMC10369233
OpenAlexW4379768623

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.