Evidence map›Paper›PMID 37288377›Full record

ArticleRSC advances2023

Study of fusion peptide release for the spike protein of SARS-CoV-2.

Jie Yu, Zhi-Wei Zhang, Han-Yu Yang, Chong-Jin Liu, Wen-Cai Lu

Open access · goldAbstract read
In one paragraph

Article in RSC advances, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.3field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Jie YuCollege of Physics, Qingdao University Qingdao 266071 Shandong P. R. China wencailu@qdu.edu.cn.
Zhi-Wei ZhangCollege of Physics, Qingdao University Qingdao 266071 Shandong P. R. China wencailu@qdu.edu.cn.
Han-Yu YangCollege of Physics, Qingdao University Qingdao 266071 Shandong P. R. China wencailu@qdu.edu.cn.
Chong-Jin LiuCollege of Physics, Qingdao University Qingdao 266071 Shandong P. R. China wencailu@qdu.edu.cn.
Wen-Cai LuCollege of Physics, Qingdao University Qingdao 266071 Shandong P. R. China wencailu@qdu.edu.cn.ORCID https://orcid.org/0009-0000-2052-2533
Qingdao University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The spike protein of SARS-CoV-2 can recognize the ACE2 membrane protein on the host cell and plays a key role in the membrane fusion process between the virus envelope and the host cell membrane. However, to date, the mechanism for the spike protein recognizing host cells and initiating membrane fusion remains unknown. In this study, based on the general assumption that all three S1/S2 junctions of the spike protein are cleaved, structures with different forms of S1 subunit stripping and S2' site cleavage were constructed. Then, the minimum requirement for the release of the fusion peptide was studied by all-atom structure-based MD simulations. The results from simulations showed that stripping an S1 subunit from the A-, B- or C-chain of the spike protein and cleaving the specific S2' site on the B-chain (C-chain or A-chain) may result in the release of the fusion peptide, suggesting that the requirement for the release of FP may be more relaxed than previously expected.

Identifiers

PMID37288377
PMCPMC10242618
OpenAlexW4379535039

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.