Evidence map›Paper›PMID 37286343›Full record

ArticleeNeuro2023

A Comprehensive, Affordable, Open-Source Hardware-Software Solution for Flexible Implementation of Complex Behaviors in Head-Fixed Mice.

Ali Ozgur, Soo Bin Park, Abigail Yap Flores, Mikko Oijala, Gyorgy Lur

Abstract read
In one paragraph

Article in eNeuro, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Ali OzgurUniversity of California Irvine, Irvine, California 92697.
Soo Bin ParkUniversity of California Irvine, Irvine, California 92697.
Abigail Yap FloresUniversity of California Irvine, Irvine, California 92697.
Mikko OijalaUniversity of California Irvine, Irvine, California 92697.
Gyorgy LurUniversity of California Irvine, Irvine, California 92697 glur@uci.edu.ORCID 0000-0001-7662-1776

Funding

Cortical mechanisms of stress-induced cognitive impairmentR01MH123686 · NIMH · UNIVERSITY OF CALIFORNIA-IRVINE · PI LUR, GYORGY · 2020 to 2024
$2.4M
Feedforward-feedback integration in the posterior parietal cortexR01NS127785 · NINDS · UNIVERSITY OF CALIFORNIA-IRVINE · PI Gyorgy Lur · 2022 to 2026
$2.1M
NIMH NIH HHS R01 MH123686NINDS NIH HHS R01 NS127785
6 · The paper itself

Abstract

Experiments that take advantage of head-fixed behavioral tasks have been a staple of systems neuroscience research for half a century. More recently, rodents came to the forefront of these efforts, primarily because of the rich experimental possibilities afforded by modern genetic tools. There is, however, a considerable barrier to entering this field, requiring expertise in engineering, hardware and software development, and significant time and financial commitment. Here, we present a comprehensive, open-source hardware and software solution to implement a head-fixed environment for rodent behaviors (HERBs). Our solution provides access to three frequently used experimental frameworks (two-alternative forced choice, Go-NoGo, or passive sensory stimulus presentation) in a single package. The required hardware can be built at a relatively low cost compared with commercially available solutions, from off-the-shelf components. Our graphical user interface-based software provides great experimental flexibility and requires no programming experience for either installation or use. Furthermore, an HERBs takes advantage of motorized components that allow the precise, temporal separation of behavioral phases (stimulus presentation, delays, response window and reward). Overall, we present a solution that will allow laboratories to join the growing community of systems neuroscience research at a substantially lower cost of entry.

Indexed as

NeurosciencesSoftwareAnimalsMiceRewardGo-NoGohardware-softwarehead-fixed behavioropen-sourcesensory perceptiontwo-alternative forced choice

Identifiers

PMID37286343
PMCPMC10306125

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.