Evidence map›Paper›PMID 37284915›Full record

ArticleMetabolomics : Official journal of the Metabolomic Society2023

Tuberculosis is associated with sputum metabolome variations, irrespective of patient sex or HIV status: an untargeted GCxGC-TOFMS study.

Derylize Beukes, Mari van Reenen, Du Toit Loots, Ilse du Preez

Open access · hybridAbstract read
In one paragraph

Article in Metabolomics : Official journal of the Metabolomic Society, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Effect of PKM2 onFrontiers in cellular and infection microbiology · 2026
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Derylize BeukesHuman Metabolomics, North-West University, Potchefstroom, South Africa.ORCID http://orcid.org/0000-0003-1987-4480
Mari van ReenenHuman Metabolomics, North-West University, Potchefstroom, South Africa.ORCID http://orcid.org/0000-0002-5856-3258
Du Toit LootsHuman Metabolomics, North-West University, Potchefstroom, South Africa.ORCID http://orcid.org/0000-0002-0339-6237
Ilse du PreezHuman Metabolomics, North-West University, Potchefstroom, South Africa. ilse.dupreez@nwu.ac.za.ORCID http://orcid.org/0000-0001-5456-3931
North-West University · ZA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionVarious studies have identified TB-induced metabolome variations. However, in most of these studies, a large degree of variation exists between individual patients.

objectivesTo identify differential metabolites for TB, independent of patients' sex or HIV status.

methodsUntargeted GCxGC/TOF-MS analyses were applied to the sputum of 31 TB + and 197 TB- individuals. Univariate statistics were used to identify metabolites which are significantly different between TB + and TB- individuals (a) irrespective of HIV status, and (b) with a HIV + status. Comparisons a and b were repeated for (i) all participants, (ii) males only and (iii) females only.

resultsTwenty-one compounds were significantly different between the TB + and TB- individuals within the female subgroup (11% lipids; 10% carbohydrates; 1% amino acids, 5% other and 73% unannotated), and 6 within the male subgroup (20% lipids; 40% carbohydrates; 6% amino acids, 7% other and 27% unannotated). For the HIV + patients (TB + vs. TB-), a total of 125 compounds were significant within the female subgroup (16% lipids; 8% carbohydrates; 12% amino acids, 6% organic acids, 8% other and 50% unannotated), and 44 within the male subgroup (17% lipids; 2% carbohydrates; 14% amino acids related, 8% organic acids, 9% other and 50% unannotated). Only one annotated compound, 1-oleoyl lysophosphaditic acid, was consistently identified as a differential metabolite for TB, irrespective of sex or HIV status. The potential clinical application of this compound should be evaluated further.

conclusionsOur findings highlight the importance of considering confounders in metabolomics studies in order to identify unambiguous disease biomarkers.

Indexed as

HIV InfectionsTuberculosisTuberculosis, PulmonaryAminesAmino AcidsCarbohydratesFemaleHumansLipidsMaleMetabolomeMetabolomicsSputumAminesAmino AcidsCarbohydratesLipidsConfounding factorsGCxGC-TOFMSMetabolomicsSputumTuberculosis

Identifiers

PMID37284915
PMCPMC10247825
OpenAlexW4379599330

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.