Evidence map›Paper›PMID 37284905›Full record

ArticleThe protein journal2023

Toxoplasma Gondii Importin α Shows Weak Auto-Inhibition.

Manasi Bhambid, Vishakha Dey, Sujata Walunj, Swati Patankar

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Article in The protein journal, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.6field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 3 countries.

Manasi Bhambid *Department of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Mumbai, India.ORCID 0000-0002-7146-4027
Vishakha Dey *Department of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Mumbai, India.ORCID 0000-0002-1476-623X
Sujata WalunjDepartment of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Mumbai, India.ORCID 0000-0001-5896-2921
Swati PatankarDepartment of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Mumbai, India. patankar@iitb.ac.in.ORCID 0000-0001-7633-657X
Indian Institute of Technology Bombay · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Importin α is a nuclear transporter that binds to nuclear localization signals (NLSs), consisting of 7-20 positively charged amino acids found within cargo proteins. In addition to cargo binding, intramolecular interactions also occur within the importin α protein due to binding between the importin β-binding (IBB) domain and the NLS-binding sites, a phenomenon called auto-inhibition. The interactions causing auto-inhibition are driven by a stretch of basic residues, similar to an NLS, in the IBB domain. Consistent with this, importin α proteins that do not have some of these basic residues lack auto-inhibition; a naturally occurring example of such a protein is found in the apicomplexan parasite Plasmodium falciparum. In this report, we show that importin α from another apicomplexan parasite, Toxoplasma gondii, harbors basic residues (KKR) in the IBB domain and exhibits auto-inhibition. This protein has a long, unstructured hinge motif (between the IBB domain and the NLS-binding sites) that does not contribute to auto-inhibition. However, the IBB domain may have a higher propensity to form an α-helical structure, positioning the wild-type KKR motif in an orientation that results in weaker interactions with the NLS-binding site than a KRR mutant. We conclude that the importin α protein from T. gondii shows auto-inhibition, exhibiting a different phenotype from that of P. falciparum importin α. However, our data indicate that T. gondii importin α may have a low strength of auto-inhibition. We hypothesize that low levels of auto-inhibition may confer an advantage to these important human pathogens.

Indexed as

alpha KaryopherinsToxoplasmaAmino Acid Sequencebeta KaryopherinsBinding SitesHumansNuclear Localization SignalsProtein Bindingalpha Karyopherinsbeta KaryopherinsNuclear Localization SignalsAuto-inhibitionHingeIBB domainImportin αNuclear import pathwayToxoplasma gondii

Identifiers

PMID37284905
OpenAlexW4379599515

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.