Evidence map›Paper›PMID 37284903›Full record

ArticleJournal of mathematical biology2023

Spectral dynamics of guided edge removals and identifying transient amplifiers for death-Birth updating.

Hendrik Richter

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Article in Journal of mathematical biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

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1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

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3 · Its place in the literature

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1 citing paper in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

1 author.

Hendrik RichterFaculty of Engineering, HTWK Leipzig University of Applied Sciences, Leipzig, Germany. hendrik.richter@htwk-leipzig.de.ORCID http://orcid.org/0000-0001-5417-8291

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The paper deals with two interrelated topics: (1) identifying transient amplifiers in an iterative process, and (2) analyzing the process by its spectral dynamics, which is the change in the graph spectra by edge manipulation. Transient amplifiers are networks representing population structures which shift the balance between natural selection and random drift. Thus, amplifiers are highly relevant for understanding the relationships between spatial structures and evolutionary dynamics. We study an iterative procedure to identify transient amplifiers for death-Birth updating. The algorithm starts with a regular input graph and iteratively removes edges until desired structures are achieved. Thus, a sequence of candidate graphs is obtained. The edge removals are guided by quantities derived from the sequence of candidate graphs. Moreover, we are interested in the Laplacian spectra of the candidate graphs and analyze the iterative process by its spectral dynamics. The results show that although transient amplifiers for death-Birth updating are generally rare, a substantial number of them can be obtained by the proposed procedure. The graphs identified share structural properties and have some similarity to dumbbell and barbell graphs. We analyze amplification properties of these graphs and also two more families of bell-like graphs and show that further transient amplifiers for death-Birth updating can be found. Finally, it is demonstrated that the spectral dynamics possesses characteristic features useful for deducing links between structural and spectral properties. These feature can also be taken for distinguishing transient amplifiers among evolutionary graphs in general.

Indexed as

Biological EvolutionSelection, GeneticAlgorithmsPopulation DynamicsEdge manipulationEvolutionary dynamicsLaplacian spectraRegular graphsTransient amplifiers

Identifiers

PMID37284903
PMCPMC10247861

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.