Evidence map›Paper›PMID 37284673›Full record

ArticleKidney international reports2023

Multiomics Analysis of Plasma Proteomics and Metabolomics of Steroid Resistance in Childhood Nephrotic Syndrome Using a "Patient-Specific" Approach.

Sagar Bhayana, Yue Zhao, Michael Merchant, Timothy Cummins, Julie A Dougherty, Yu Kamigaki, Wimal Pathmasiri, Susan McRitchie, Laura H Mariani, Susan Sumner and 4 more

Open access · goldAbstract read
In one paragraph

Article in Kidney international reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 1 country.

Sagar BhayanaCenter for Clinical and Translational Research, Nationwide Children's Hospital; Columbus, Ohio, USA.
Yue ZhaoDepartment of Computational Medicine and Bioinformatics, University of Michigan Medical School, Ann Arbor, Michigan, USA.
Michael MerchantDepartment of Medicine, Division of Nephrology and Hypertension, University of Louisville; Louisville, Kentucky, USA.
Timothy CumminsDepartment of Medicine, Division of Nephrology and Hypertension, University of Louisville; Louisville, Kentucky, USA.
Julie A DoughertyCenter for Clinical and Translational Research, Nationwide Children's Hospital; Columbus, Ohio, USA.
Yu KamigakiCenter for Clinical and Translational Research, Nationwide Children's Hospital; Columbus, Ohio, USA.
Wimal PathmasiriDepartment of Nutrition, Nutrition Research Institute, University of North Carolina at Chapel Hill; Kannapolis, North Carolina, USA.
Susan McRitchieDepartment of Nutrition, Nutrition Research Institute, University of North Carolina at Chapel Hill; Kannapolis, North Carolina, USA.
Laura H MarianiDivision of Nephrology, Department of Internal Medicine, Michigan Medicine, Ann Arbor, Michigan, USA.
Susan SumnerDepartment of Nutrition, Nutrition Research Institute, University of North Carolina at Chapel Hill; Kannapolis, North Carolina, USA.
Jon B KleinDepartment of Medicine, Division of Nephrology and Hypertension, University of Louisville; Louisville, Kentucky, USA.
Lang LiDepartment of Pediatrics, College of Medicine, The Ohio State University, Columbus, Ohio, USA.
William E SmoyerCenter for Clinical and Translational Research, Nationwide Children's Hospital; Columbus, Ohio, USA.
Pediatric Nephrology Research Consortium
Nationwide Children's Hospital · USUniversity of Louisville · USUniversity of North Carolina at Chapel Hill · USMichigan Medicine · USThe Ohio State University · USUniversity of Michigan · US

Funding

Role of oxidized linoleic acid metabolites in the pathogenesis of alcoholic liver diseaseP20GM113226 · NIGMS · UNIVERSITY OF LOUISVILLE · PI MCCLAIN, CRAIG J. · 2016 to 2025
$24.1M
The Role of Nutrition in the Development/Progression of Alcohol-Induced Organ InjuryP50AA024337 · NIAAA · UNIVERSITY OF LOUISVILLE · PI CRAIG J. MCCLAIN · 2016 to 2026
$17.9M
University of Louisville Center for Integrative Environmental Health SciencesP30ES030283 · NIEHS · UNIVERSITY OF LOUISVILLE · PI Amanda Jo LeBlanc · 2020 to 2026
$10.0M
Biomarkers of Alcoholic HepatitisR01AA028436 · NIAAA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI ARTEEL, GAVIN E, BENOS, PANAGIOTIS V · 2020 to 2024
$3.0M
Novel Biomarkers for Post-Liver Transplant NASH FibrosisR01DK130294 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI ARTEEL, GAVIN E, BENOS, PANAGIOTIS V · 2022 to 2025
$2.8M
Integrating Proteomics and Metabolomics to Understand Pediatric Glomerular Disease Pathophysiology and PrognosisR01DK110077 · NIDDK · RESEARCH INST NATIONWIDE CHILDREN'S HOSP · PI KLEIN, JON, SMOYER, WILLIAM E · 2016 to 2020
$1.8M
NIAAA NIH HHS P50 AA024337NIAAA NIH HHS R01 AA028436NIDDK NIH HHS R01 DK110077NIDDK NIH HHS R01 DK130294NIEHS NIH HHS P30 ES030283NIGMS NIH HHS P20 GM113226
6 · The paper itself

Abstract

Introduction: Nephrotic syndrome (NS) occurs commonly in children with glomerular disease and glucocorticoids (GCs) are the mainstay treatment. Steroid resistant NS (SRNS) develops in 15% to 20% of children, increasing the risk of chronic kidney disease compared to steroid sensitive NS (SSNS). NS pathogenesis is unclear in most children, and no biomarkers exist that predict the development of pediatric SRNS. Methods: We studied a unique patient cohort with plasma specimens collected before GC treatment, yielding a disease-only sample not confounded by steroid-induced gene expression changes (SSNS Results: Joint pathway analyses revealed perturbations in nicotinate or nicotinamide and butanoate metabolic pathways in patients with SRNS. Patients with SSNS had perturbations of lysine degradation, mucin type O-glycan biosynthesis, and glycolysis or gluconeogenesis pathways. Molecular analyses revealed frequent alteration of molecules within these pathways that had not been observed by separate proteomic and metabolomic studies. We observed upregulation of NAMPT, NMNAT1, and SETMAR in patients with SRNS, in contrast to upregulation of ALDH1B1, ACAT1, AASS, ENPP1, and pyruvate in patients with SSNS Conclusion: These studies confirmed that a novel "patient-specific" bioinformatic approach can integrate disparate omics datasets and identify candidate SRNS biomarkers not observed by separate proteomic or metabolomic analysis.

Indexed as

biomarkerinformaticsMetaboAnalystRnephrosispersonalizedsteroid resistance

Identifiers

PMID37284673
PMCPMC10239920
OpenAlexW4360604051

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.