Evidence map›Paper›PMID 37278944›Full record

ArticlePlant reproduction2023

A simple method for measuring pollen germination rate using machine learning.

Akira Yamazaki, Ao Takezawa, Kyoka Nagasaka, Ko Motoki, Kazusa Nishimura, Ryohei Nakano, Tetsuya Nakazaki

Abstract read
PubMed Publisher
In one paragraph

Article in Plant reproduction, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
4.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Akira YamazakiFaculty of Agriculture, Kindai University, Nara, 631-8505, Japan. yamazaki@nara.kindai.ac.jp.ORCID 0000-0001-8259-0451
Ao TakezawaGraduate School of Agriculture, Kyoto University, Kizugawa, 619-0218, Japan.
Kyoka NagasakaGraduate School of Agriculture, Kyoto University, Kizugawa, 619-0218, Japan.
Ko MotokiGraduate School of Agriculture, Kyoto University, Kizugawa, 619-0218, Japan.
Kazusa NishimuraGraduate School of Agriculture, Kyoto University, Kizugawa, 619-0218, Japan.
Ryohei NakanoGraduate School of Agriculture, Kyoto University, Kizugawa, 619-0218, Japan.
Tetsuya NakazakiGraduate School of Agriculture, Kyoto University, Kizugawa, 619-0218, Japan.
Kyoto University · JPKindai University · JP

Funding

Kaken Pharmaceutical 21K05575
6 · The paper itself

Abstract

The pollen germination rate decreases under various abiotic stresses, such as high-temperature stress, and it is one of the causes of inhibition of plant reproduction. Thus, measuring pollen germination rate is vital for understanding the reproductive ability of plants. However, measuring the pollen germination rate requires much labor when counting pollen. Therefore, we used the Yolov5 machine learning package in order to perform transfer learning and constructed a model that can detect germinated and non-germinated pollen separately. Pollen images of the chili pepper, Capsicum annuum, were used to create this model. Using images with a width of 640 pixels for training constructed a more accurate model than using images with a width of 320 pixels. This model could estimate the pollen germination rate of the F

Indexed as

CapsicumGerminationGenome-Wide Association StudyPollenReproductionAbiotic stressChili pepperMicroscopeObject detectionYolov5

Identifiers

PMID37278944
OpenAlexW4379508070

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.