Evidence map›Paper›PMID 37276970›Full record

ArticleDevelopmental biology2023

Rap1 regulates lumen continuity via Afadin in renal epithelia.

Chitkale Hiremath, Lei Gao, Kenya Geshow, Quinten Patterson, Haley Barlow, Ondine Cleaver, Denise K Marciano

Open access · greenAbstract read
In one paragraph

Article in Developmental biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. The dynamics of tubulogenesis in development and disease.Development (Cambridge, England) · 2025
    Review
  5. Epithelial tubule interconnection driven by HGF-Met signaling in the kidney.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  6. Article
  7. Article
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Chitkale HiremathDepartment of Internal Medicine, Division of Nephrology, University of Texas Southwestern Medical Center, Dallas, TX, 75235, USA; Department of Cell Biology, University of Texas Southwestern Medical Center, Dallas, TX, 75235, USA.
Lei GaoDepartment of Internal Medicine, Division of Nephrology, University of Texas Southwestern Medical Center, Dallas, TX, 75235, USA.
Kenya GeshowDepartment of Internal Medicine, Division of Nephrology, University of Texas Southwestern Medical Center, Dallas, TX, 75235, USA; Department of Cell Biology, University of Texas Southwestern Medical Center, Dallas, TX, 75235, USA.
Quinten PattersonDepartment of Internal Medicine, Division of Nephrology, University of Texas Southwestern Medical Center, Dallas, TX, 75235, USA; Department of Cell Biology, University of Texas Southwestern Medical Center, Dallas, TX, 75235, USA.
Haley BarlowDepartment of Molecular Biology, University of Texas Southwestern Medical Center, Dallas, TX, 75235, USA.
Ondine CleaverDepartment of Molecular Biology, University of Texas Southwestern Medical Center, Dallas, TX, 75235, USA.
Denise K MarcianoDepartment of Internal Medicine, Division of Nephrology, University of Texas Southwestern Medical Center, Dallas, TX, 75235, USA; Department of Cell Biology, University of Texas Southwestern Medical Center, Dallas, TX, 75235, USA. Electronic address: denise.marciano@utsouthwestern.edu.
The University of Texas Southwestern Medical Center · USSouthwestern Medical Center · US

Funding

UT Southwestern O'Brien Kidney Research Core CenterP30DK079328 · NIDDK · UT SOUTHWESTERN MEDICAL CENTER · PI MOE, ORSON W · 2007 to 2021
$16.9M
Application of Progenitor Niche Signals to Ex Vivo NephrogenesisRC2DK125960 · NIDDK · ROGOSIN INSTITUTE · PI CARROLL, THOMAS JOSEPH, CLEAVER, ONDINE B · 2021 to 2025
$7.4M
UT Southwestern NORCP30DK127984 · NIDDK · UT SOUTHWESTERN MEDICAL CENTER · PI Jeff G McDonald · 2022 to 2026
$7.4M
Identifying pathways required for integration of kidney organoid and host epitheliaUC2DK126021 · NIDDK · MOUNT DESERT ISLAND BIOLOGICAL LAB · PI DRUMMOND, IAIN A., MARCIANO, DENISE K · 2020 to 2024
$3.1M
The Role of Renal Interstitium in Kidney DevelopmentR01DK127634 · NIDDK · UT SOUTHWESTERN MEDICAL CENTER · PI CARROLL, THOMAS JOSEPH, PARK, JOO-SEOP · 2021 to 2024
$2.8M
The Role of Nephronectin in Glomerular Development and FunctionR01DK118032 · NIDDK · UT SOUTHWESTERN MEDICAL CENTER · PI MARCIANO, DENISE K · 2018 to 2022
$1.8M
Role of afadin signaling in nephron tubulogenesisR01DK099478 · NIDDK · UT SOUTHWESTERN MEDICAL CENTER · PI MARCIANO, DENISE K · 2014 to 2018
$1.7M
Role of Afadin in 3D epithelial plexus morphogenesis and beta cell massR01DK116622 · NIDDK · UT SOUTHWESTERN MEDICAL CENTER · PI CLEAVER, ONDINE B, MARCIANO, DENISE K · 2019 to 2022
$1.7M
Application of Progenitor Niche Signals to Ex Vivo NephrogenesisR56DK125960 · NIDDK · UT SOUTHWESTERN MEDICAL CENTER · PI CARROLL, THOMAS JOSEPH, CLEAVER, ONDINE B · 2020 to 2020
$530k
NIDDK NIH HHS P30 DK079328NIDDK NIH HHS P30 DK127984NIDDK NIH HHS R01 DK099478NIDDK NIH HHS R01 DK116622NIDDK NIH HHS R01 DK118032NIDDK NIH HHS R01 DK127634NIDDK NIH HHS R56 DK125960NIDDK NIH HHS RC2 DK125960NIDDK NIH HHS UC2 DK126021
6 · The paper itself

Abstract

The continuity of a lumen within an epithelial tubule is critical for its function. We previously found that the F-actin binding protein Afadin is required for timely lumen formation and continuity in renal tubules formed from the nephrogenic mesenchyme in mice. Afadin is a known effector and interactor of the small GTPase Rap1, and in the current study, we examine the role of Rap1 in nephron tubulogenesis. Here, we demonstrate that Rap1 is required for nascent lumen formation and continuity in cultured 3D epithelial spheroids and in vivo in murine renal epithelial tubules derived from the nephrogenic mesenchyme, where its absence ultimately leads to severe morphogenetic defects in the tubules. By contrast, Rap1 is not required for lumen continuity or morphogenesis in renal tubules derived from the ureteric epithelium, which differ in that they form by extension from a pre-existing tubule. We further demonstrate that Rap1 is required for correct localization of Afadin to adherens junctions both in vitro and in vivo. Together, these results suggest a model in which Rap1 localizes Afadin to junctional complexes, which in turn regulates nascent lumen formation and positioning to ensure continuous tubulogenesis.

Indexed as

Kidney TubulesMicrofilament ProteinsAdherens JunctionsAnimalsKinesinsMiceMyosinsNephronsrap1 GTP-Binding ProteinsafadinAfdn protein, mouseKinesinsMicrofilament ProteinsMyosinsrap1 GTP-Binding ProteinsRap1 protein, mouseAfadinEpithelial cellsKidney developmentLumenNephronPolarityRap1TubulesTubulogenesis

Identifiers

PMID37276970
PMCPMC10460627
OpenAlexW4379194072

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.