Evidence map›Paper›PMID 37276409›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2023

Role of the bicarbonate transporter SLC4γ in stony-coral skeleton formation and evolution.

Amanda I Tinoco, Lorna M Y Mitchison-Field, Jacob Bradford, Christian Renicke, Dimitri Perrin, Line K Bay, John R Pringle, Phillip A Cleves

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
5.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 23 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Building like a Coral-Parallelized, Multiscale Biofabrication.Advanced materials (Deerfield Beach, Fla.) · 2026
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Photosynthesis and other factors affecting the establishment and maintenance of cnidarian-dinoflagellate symbiosis.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2024
    Article
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Amanda I TinocoDepartment of Embryology, Carnegie Institution for Science, Baltimore, MD 21218.ORCID 0000-0002-2056-3359
Lorna M Y Mitchison-FieldDepartment of Embryology, Carnegie Institution for Science, Baltimore, MD 21218.ORCID 0000-0002-4235-7935
Jacob BradfordCentre for Data Science, Queensland University of Technology, Brisbane, QLD 4001, Australia.ORCID 0000-0003-3619-5682
Christian RenickeDepartment of Genetics, Stanford University School of Medicine, Stanford, CA 94305.
Dimitri PerrinCentre for Data Science, Queensland University of Technology, Brisbane, QLD 4001, Australia.ORCID 0000-0002-4007-5256
Line K BayAustralian Institute of Marine Science, Townsville, QLD 4810, Australia.
John R PringleDepartment of Genetics, Stanford University School of Medicine, Stanford, CA 94305.ORCID 0000-0003-4140-0732
Phillip A ClevesDepartment of Embryology, Carnegie Institution for Science, Baltimore, MD 21218.ORCID 0000-0002-8526-8940
Carnegie Institution for Science · USQueensland University of Technology · AUStanford University · USAustralian Institute of Marine Science · AU

Funding

Cellular and Molecular BiologyT32GM141804 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI John Kim · 2021 to 2026
$5.1M
NIGMS NIH HHS T32 GM141804
6 · The paper itself

Abstract

Coral reefs are highly diverse ecosystems of immense ecological, economic, and aesthetic importance built on the calcium-carbonate-based skeletons of stony corals. The formation of these skeletons is threatened by increasing ocean temperatures and acidification, and a deeper understanding of the molecular mechanisms involved may assist efforts to mitigate the effects of such anthropogenic stressors. In this study, we focused on the role of the predicted bicarbonate transporter SLC4γ, which was suggested in previous studies to be a product of gene duplication and to have a role in coral-skeleton formation. Our comparative-genomics study using 30 coral species and 15 outgroups indicates that SLC4γ is present throughout the stony corals, but not in their non-skeleton-forming relatives, and apparently arose by gene duplication at the onset of stony-coral evolution. Our expression studies show that

Indexed as

AnthozoaAnimalsBicarbonatesCalciumCoral ReefsEcosystemBicarbonatesCalciumAcropora milleporaCRISPR/Cas9gene duplicationgenome editingneofunctionalization

Identifiers

PMID37276409
PMCPMC10268325
OpenAlexW4379469407

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.