Evidence map›Paper›PMID 37276233›Full record

ArticlePLoS genetics2023

The novel anti-phage system Shield co-opts an RmuC domain to mediate phage defense across Pseudomonas species.

Elliot Macdonald, Rosanna Wright, James P R Connolly, Henrik Strahl, Michael Brockhurst, Stineke van Houte, Tim R Blower, Tracy Palmer, Giuseppina Mariano

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
4.5field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 19 citations in OpenAlex.

  1. Review
  2. Article
  3. Genomic islands inNAR genomics and bioinformatics · 2025
    Article
  4. Modified DNA substrate selectivity by GmrSD-family Type IV restriction enzyme BrxU.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
    Article
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  12. Review
  13. Correlation ofInternational journal of molecular sciences · 2024
    Article
  14. Review
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Elliot MacdonaldMicrobes in Health and Disease Theme, Newcastle University Biosciences Institute, Newcastle University, Newcastle upon Tyne, United Kingdom.
Rosanna WrightDivision of Evolution, Infection and Genomics, School of Biological Sciences, University of Manchester, Manchester, United Kingdom.ORCID 0000-0002-8095-8256
James P R ConnollyMicrobes in Health and Disease Theme, Newcastle University Biosciences Institute, Newcastle University, Newcastle upon Tyne, United Kingdom.ORCID 0000-0002-0394-3413
Henrik StrahlCentre for Bacterial Cell Biology, Biosciences Institute, Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, United Kingdom.
Michael BrockhurstDivision of Evolution, Infection and Genomics, School of Biological Sciences, University of Manchester, Manchester, United Kingdom.
Stineke van HouteEnvironment and Sustainability Institute, University of Exeter, Penryn Campus, Penryn, Cornwall, United Kingdom.ORCID 0000-0001-7047-1308
Tim R BlowerDepartment of Biosciences, Durham University, Stockton Road, Durham, United Kingdom.
Tracy PalmerMicrobes in Health and Disease Theme, Newcastle University Biosciences Institute, Newcastle University, Newcastle upon Tyne, United Kingdom.
Giuseppina MarianoMicrobes in Health and Disease Theme, Newcastle University Biosciences Institute, Newcastle University, Newcastle upon Tyne, United Kingdom.ORCID 0000-0003-1197-2123
Newcastle University · GBUniversity of Manchester · GBDurham University · GBUniversity of Exeter · GB

Funding

Wellcome Trust
6 · The paper itself

Abstract

Competitive bacteria-bacteriophage interactions have resulted in the evolution of a plethora of bacterial defense systems preventing phage propagation. In recent years, computational and bioinformatic approaches have underpinned the discovery of numerous novel bacterial defense systems. Anti-phage systems are frequently encoded together in genomic loci termed defense islands. Here we report the identification and characterisation of a novel anti-phage system, that we have termed Shield, which forms part of the Pseudomonas defensive arsenal. The Shield system comprises the core component ShdA, a membrane-bound protein harboring an RmuC domain. Heterologous production of ShdA alone is sufficient to mediate bacterial immunity against several phages. We demonstrate that Shield and ShdA confer population-level immunity and that they can also decrease transformation efficiency. We further show that ShdA homologues can degrade DNA in vitro and, when expressed in a heterologous host, can alter the organisation of the host chromosomal DNA. Use of comparative genomic approaches identified how Shield can be divided into four subtypes, three of which contain additional components that in some cases can negatively affect the activity of ShdA and/or provide additional lines of phage defense. Collectively, our results identify a new player within the Pseudomonas bacterial immunity arsenal that displays a novel mechanism of protection, and reveals a role for RmuC domains in phage defense.

Indexed as

BacteriophagesBacteriaGenomePseudomonas

Identifiers

PMID37276233
PMCPMC10270631
OpenAlexW4379471890

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.