Evidence map›Paper›PMID 37276232›Full record

ArticlePLoS neglected tropical diseases2023

Variants of CARD8 in Leishmania guyanensis-cutaneous leishmaniasis and influence of the variants genotypes on circulating plasma cytokines IL-1β, TNFα and IL-8.

Héctor David Graterol Sequera, Josué Lacerda de Souza, José do Espírito Santo Junior, Lener Santos da Silva, Suzana Kanawati Pinheiro, Herllon Karllos Athaydes Kerr, Mara Lúcia Gomes de Souza, Marcus Vinitius de Farias Guerra, Tirza Gabrielle Ramos de Mesquita, Rajendranath Ramasawmy

Open access · goldAbstract read
In one paragraph

Article in PLoS neglected tropical diseases, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Caspase-1 Variants and Plasma IL-1β in Patients withInternational journal of molecular sciences · 2024
    Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Héctor David Graterol SequeraPrograma de Pós-Graduação em Medicina Tropical, Universidade do Estado do Amazonas, Manaus, Brazil.
Josué Lacerda de SouzaFaculdade de Medicina Nilton Lins, Universidade Nilton Lins, Manaus, Brazil.
José do Espírito Santo JuniorFaculdade de Medicina Nilton Lins, Universidade Nilton Lins, Manaus, Brazil.
Lener Santos da SilvaFaculdade de Medicina Nilton Lins, Universidade Nilton Lins, Manaus, Brazil.
Suzana Kanawati PinheiroPrograma de Pós-Graduação em Medicina Tropical, Universidade do Estado do Amazonas, Manaus, Brazil.
Herllon Karllos Athaydes KerrPrograma de Pós-Graduação em Medicina Tropical, Universidade do Estado do Amazonas, Manaus, Brazil.
Mara Lúcia Gomes de SouzaFundação de Medicina Tropical Doutor Heitor Vieira Dourado, Manaus, Brazil.
Marcus Vinitius de Farias GuerraPrograma de Pós-Graduação em Medicina Tropical, Universidade do Estado do Amazonas, Manaus, Brazil.
Tirza Gabrielle Ramos de MesquitaPrograma de Pós-Graduação em Medicina Tropical, Universidade do Estado do Amazonas, Manaus, Brazil.
Rajendranath RamasawmyPrograma de Pós-Graduação em Medicina Tropical, Universidade do Estado do Amazonas, Manaus, Brazil.ORCID 0000-0002-0538-0773
Fundação de Medicina Tropical · BRUniversidade Nilton Lins · BRUniversidade do Estado do Amazonas · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nucleotide-binding oligomerization domain, leucine-rich repeat-containing protein family (NLR) are intracellular pathogen recognition receptors mediating innate immunity, releasing proinflammatory cytokines IL-1β and IL-18, and promoting pyroptotic cell death, upon sensing pathogenic or endogenous danger signals. In animal models, NLRP3 inflammasome has a dual role, pathogenic or protective in Leishmania-infection, depending on the Leishmania species and mice strain. Caspase recruitment containing domain 8 (CARD8) is a negative regulator of NLRP3 inflammasome and also an inhibitor of transcription factor NFĸB, a major transcription factor of proinflammatory cytokines. We investigated whether single nucleotide variants in CARD8 may partially explain why only a proportion of individuals coming from the same area of endemicity of leishmaniasis develop cutaneous leishmaniasis caused by Leishmania guyanensis. We genotyped four single nucleotide variants of the CARD8 gene by direct nucleotide sequencing in 1741 individuals from an endemic area of leishmaniasis, constituting 850 patients with CL and 891 healthy controls. The frequencies of the genotypes of the variants rs2288877 T>C, rs73944113 C>T, and rs2043211 A>T are similar among the patients with CL and HC, while the variant rs2288876 A>G) reveals an excess of the genotype AA among the patients with CL (44%) compared to 37% in the HC group. Allele A of the variant rs2288876 A>G) is associated with susceptibility to CL (OR = 1.2 [95%CI 1.03-1.4]; P = 0.01). Haplotype analysis showed that individuals harboring the haplotype CCAA have 280% odds of developing CL caused by L. guyanensis (OR = 3.8 [95% CI 2.0-7.7]; p = 0.00004). The variants rs2288877 T>C and rs2288876 A>G correlate with the plasma level of IL-8. Spearman correlation showed a significant positive correlation between the rs2288876 A>G allele A and the level of IL-8 (ρ = 0.22; p = 0.0002). CARD8 may partially contribute to the development of CL caused by L. guyanensis.

Indexed as

CARD Signaling Adaptor ProteinsLeishmania guyanensisLeishmaniasis, CutaneousCytokinesGenetic Predisposition to DiseaseGenotypeHumansInflammasomesInterleukin-1betaInterleukin-8Neoplasm ProteinsNLR Family, Pyrin Domain-Containing 3 ProteinPolymorphism, Single NucleotideTumor Necrosis Factor-alphaCARD8 protein, humanCARD Signaling Adaptor ProteinsCytokinesIL1B protein, humanInflammasomesInterleukin-1betaInterleukin-8Neoplasm ProteinsNLR Family, Pyrin Domain-Containing 3 ProteinTumor Necrosis Factor-alpha

Identifiers

PMID37276232
PMCPMC10270566
OpenAlexW4379468269

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.