Evidence map›Paper›PMID 37274781›Full record

ArticleFrontiers in genetics2023

SPARTIN: a Bayesian method for the quantification and characterization of cell type interactions in spatial pathology data.

Nathaniel Osher, Jian Kang, Santhoshi Krishnan, Arvind Rao, Veerabhadran Baladandayuthapani

Open access · goldAbstract read
In one paragraph

Article in Frontiers in genetics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Nathaniel OsherDepartment of Biostatistics, University of Michigan, Ann Arbor, MI, United States.
Jian KangDepartment of Biostatistics, University of Michigan, Ann Arbor, MI, United States.
Santhoshi KrishnanDepartment of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, MI, United States.
Arvind RaoDepartment of Biostatistics, University of Michigan, Ann Arbor, MI, United States.
Veerabhadran BaladandayuthapaniDepartment of Biostatistics, University of Michigan, Ann Arbor, MI, United States.
University of Michigan–Ann Arbor · USRice University · US

Funding

XenograftP30CA046592 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI THEODORE S LAWRENCE · 1988 to 2026
$178.2M
Biostatistics Training Program in Cancer ResearchT32CA083654 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Veerabhadran Baladandayuthapani, Kelley McLain Kidwell · 2002 to 2026
$4.3M
Bayesian Network-Based Integrative Genomics Methods for Precision MedicineR01CA244845 · NCI · UNIVERSITY OF PENNSYLVANIA · PI BALADANDAYUTHAPANI, VEERABHADRAN, MORRIS, JEFFREY S · 2021 to 2024
$1.8M
NCI NIH HHS P30 CA046592NCI NIH HHS R01 CA244845NCI NIH HHS T32 CA083654
6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

Bayesian modelingdigital pathologyhierarchical strauss modelsspatial point processestumor-immune microenvironments

Identifiers

PMID37274781
PMCPMC10232864
OpenAlexW4377102956

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.