Evidence map›Paper›PMID 37272862›Full record

ArticleThe CRISPR journal2023

The Transposon-Encoded Protein TnpB Processes Its Own mRNA into ωRNA for Guided Nuclease Activity.

Suchita P Nety, Han Altae-Tran, Soumya Kannan, F Esra Demircioglu, Guilhem Faure, Seiichi Hirano, Kepler Mears, Yugang Zhang, Rhiannon K Macrae, Feng Zhang

Open access · hybridAbstract read
In one paragraph

Article in The CRISPR journal, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
5.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. STAGE: A compact and versatile TnpB-based genome editing toolkit forProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  6. Article
  7. Review
  8. Transposons disrupt genomic stability and trigger cancers.Frontiers in cellular and infection microbiology · 2025
    Review
  9. Article
  10. CanFrontiers in cellular and infection microbiology · 2025
    Article
  11. Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Suchita P NetyHoward Hughes Medical Institute, Cambridge, Massachusetts, USA.ORCID 0000-0002-4201-1061
Han Altae-TranHoward Hughes Medical Institute, Cambridge, Massachusetts, USA.
Soumya KannanHoward Hughes Medical Institute, Cambridge, Massachusetts, USA.
F Esra DemirciogluHoward Hughes Medical Institute, Cambridge, Massachusetts, USA.
Guilhem FaureHoward Hughes Medical Institute, Cambridge, Massachusetts, USA.
Seiichi HiranoHoward Hughes Medical Institute, Cambridge, Massachusetts, USA.
Kepler MearsHoward Hughes Medical Institute, Cambridge, Massachusetts, USA.
Yugang ZhangHoward Hughes Medical Institute, Cambridge, Massachusetts, USA.
Rhiannon K MacraeHoward Hughes Medical Institute, Cambridge, Massachusetts, USA.
Feng ZhangHoward Hughes Medical Institute, Cambridge, Massachusetts, USA.ORCID 0000-0003-0178-7995
Broad Institute · US

Funding

Medical Scientist Training ProgramT32GM007753 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI WALENSKY, LOREN DAVID · 1985 to 2021
$50.0M
Medical Scientist Training ProgramT32GM144273 · NIGMS · HARVARD MEDICAL SCHOOL · PI David Shumway Jones, Jacqueline A. Lees · 2022 to 2026
$14.7M
Programmable RNA-targeting toolsR01HG009761 · NHGRI · BROAD INSTITUTE, INC. · PI ZHANG, FENG · 2017 to 2024
$7.5M
NHGRI NIH HHS R01 HG009761NIGMS NIH HHS T32 GM007753NIGMS NIH HHS T32 GM144273
6 · The paper itself

Abstract

TnpB is a member of the Obligate Mobile Element Guided Activity (OMEGA) RNA-guided nuclease family, is harbored in transposons, and likely functions to maintain the transposon in genomes. Previously, it was shown that TnpB cleaves double- and single-stranded DNA substrates in an RNA-guided manner, but the biogenesis of the TnpB ribonucleoprotein (RNP) complex is unknown. Using

Indexed as

DNA Transposable ElementsGene EditingCRISPR-Cas SystemsRNARNA, MessengerDNA Transposable ElementsRNARNA, Messenger

Identifiers

PMID37272862
PMCPMC10278001
OpenAlexW4379377215

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.