Evidence map›Paper›PMID 37272420›Full record

ArticleDevelopment (Cambridge, England)2023

Molecular mechanism of synovial joint site specification and induction in developing vertebrate limbs.

Upendra S Yadav, Tathagata Biswas, Pratik N Singh, Pankaj Gupta, Soura Chakraborty, Irene Delgado, Hamim Zafar, Terence D Capellini, Miguel Torres, Amitabha Bandyopadhyay

Open access · bronzeAbstract read
In one paragraph

Article in Development (Cambridge, England), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
  2. Article
  3. Creb5 controls its own expression and directly induces the joint interzone regulatory program.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 3 countries.

Upendra S YadavDepartment of Biological Sciences and Bioengineering, Indian Institute of Technology Kanpur, Kanpur, Uttar Pradesh 208016, India.
Tathagata BiswasDepartment of Biological Sciences and Bioengineering, Indian Institute of Technology Kanpur, Kanpur, Uttar Pradesh 208016, India.ORCID 0000-0002-4067-3643
Pratik N SinghDepartment of Biological Sciences and Bioengineering, Indian Institute of Technology Kanpur, Kanpur, Uttar Pradesh 208016, India.
Pankaj GuptaDepartment of Biological Sciences and Bioengineering, Indian Institute of Technology Kanpur, Kanpur, Uttar Pradesh 208016, India.
Soura ChakrabortyDepartment of Biological Sciences and Bioengineering, Indian Institute of Technology Kanpur, Kanpur, Uttar Pradesh 208016, India.ORCID 0000-0002-3653-9652
Irene DelgadoCardiovascular Regeneration Program, Centro Nacional de Investigaciones Cardiovasculares, CNIC, 28029 Madrid, Spain.
Hamim ZafarDepartment of Biological Sciences and Bioengineering, Indian Institute of Technology Kanpur, Kanpur, Uttar Pradesh 208016, India.ORCID 0000-0002-1617-2806
Terence D CapelliniDepartment of Human Evolutionary Biology, Harvard University, 11 Divinity Avenue, Cambridge, MA 02138, USA.
Miguel TorresCardiovascular Regeneration Program, Centro Nacional de Investigaciones Cardiovasculares, CNIC, 28029 Madrid, Spain.
Amitabha BandyopadhyayDepartment of Biological Sciences and Bioengineering, Indian Institute of Technology Kanpur, Kanpur, Uttar Pradesh 208016, India.ORCID 0000-0002-0429-438X
Indian Institute of Technology Kanpur · INInstituto de Salud Carlos III · ESBroad Institute · US

Funding

Uncovering the Genetic Mechanisms Behind Joint-Specific OsteoarthritisR01AR070139 · NIAMS · HARVARD UNIVERSITY · PI CAPELLINI, TERENCE D · 2018 to 2022
$3.3M
Molecular architecture of the human knee joint and pelvis at single cell resolutionR01AR081274 · NIAMS · HARVARD UNIVERSITY · PI Terence D Capellini, April Marie Craft · 2023 to 2026
$3.1M
NIAMS NIH HHS R01 AR070139NIAMS NIH HHS R01 AR081274
6 · The paper itself

Abstract

The vertebrate appendage comprises three primary segments, the stylopod, zeugopod and autopod, each separated by joints. The molecular mechanisms governing the specification of joint sites, which define segment lengths and thereby limb architecture, remain largely unknown. Existing literature suggests that reciprocal gradients of retinoic acid (RA) and fibroblast growth factor (FGF) signaling define the expression domains of the putative segment markers Meis1, Hoxa11 and Hoxa13. Barx1 is expressed in the presumptive joint sites. Our data demonstrate that RA-FGF signaling gradients define the expression domain of Barx1 in the first presumptive joint site. When misexpressed, Barx1 induces ectopic interzone-like structures, and its loss of function partially blocks interzone development. Simultaneous perturbations of RA-FGF signaling gradients result in predictable shifts of Barx1 expression domains along the proximo-distal axis and, consequently, in the formation of repositioned joints. Our data suggest that during early limb bud development in chick, Meis1 and Hoxa11 expression domains are overlapping, whereas the Barx1 expression domain resides within the Hoxa11 expression domain. However, once the interzone is formed, the expression domains are refined and the Barx1 expression domain becomes congruent with the border of these two putative segment markers.

Indexed as

JointsTranscription FactorsAnimalsExtremitiesGene Expression Regulation, DevelopmentalMyeloid Ecotropic Viral Integration Site 1 ProteinVertebratesMyeloid Ecotropic Viral Integration Site 1 ProteinTranscription FactorsBarx1Cartilage segmentationLimb patterningRA/FGF signalingSynovial joints

Identifiers

PMID37272420
PMCPMC10323242
OpenAlexW4379376044

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.